RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 RPA4Q13156 261 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 BOP1Q14137 746 aaKnown RBP10.21□□□□□ -0.77
RFC1-211ENST00000509084 CSHL1Q14406 222 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 GBX1Q14549 363 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 ZNF460Q14592 562 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 ACAP2Q15057 778 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 PPM1JQ5JR12 505 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 ZNF648Q5T619 568 aaPredicted RBP10.21□□□□□ -0.77
RFC1-211ENST00000509084 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 TSSK4Q6SA08 328 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 PAQR3Q6TCH7 311 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 NEK10Q6ZWH5 1172 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 GALNT13Q8IUC8 556 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 CPNE9Q8IYJ1 553 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 CENPLQ8N0S6 344 aaPredicted RBP10.21□□□□□ -0.77
RFC1-211ENST00000509084 OXR1Q8N573 874 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 FRMD1Q8N878 549 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 MFSD2AQ8NA29 543 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 SIDT2Q8NBJ9 832 aaKnown RBP10.21□□□□□ -0.77
RFC1-211ENST00000509084 OR56A4Q8NGH8 313 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 OR2L2Q8NH16 312 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 RDH11Q8TC12 318 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 LKAAEAR1Q8TD35 194 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 TCP10LQ8TDR4 215 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 KCTD4Q8WVF5 259 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 DNASE2BQ8WZ79 361 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 TMEM159Q96B96 161 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 KLHDC7BQ96G42 594 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 SCARF2Q96GP6 870 aaPredicted RBP10.21□□□□□ -0.77
RFC1-211ENST00000509084 TIMM29Q9BSF4 260 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 LGR4Q9BXB1 951 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 C1QTNF1Q9BXJ1 281 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 MRPL46Q9H2W6 279 aaKnown RBP10.21□□□□□ -0.77
RFC1-211ENST00000509084 EBF2Q9HAK2 575 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 AASDHPPTQ9NRN7 309 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 GPR27Q9NS67 375 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 KLQ9UEF7 1012 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 INVSQ9Y283 1065 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 PLLPQ9Y342 182 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 PCDHGA10Q9Y5H3 936 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 NUMA1Q14980 2115 aa10.21□□□□□ -0.78
RFC1-211ENST00000509084 CUL9Q8IWT3 2517 aa10.21□□□□□ -0.78
RFC1-211ENST00000509084 PRSS38A1L453 326 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 FOXO6A8MYZ6 492 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 PRR5-ARHGAP8B1AHC4 643 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 DNAJC6O75061 913 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 CEACAM5P06731 702 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 THEGLP0DJG4 465 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 CD38P28907 300 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 CCR7P32248 378 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 BLKP51451 505 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 ARHGAP8P85298 464 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 IRF9Q00978 393 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 EML5Q05BV3 1969 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 DMPKQ09013 629 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 SP140Q13342 867 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 LRP8Q14114 963 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 N4BP2L1Q5TBK1 243 aaPredicted RBP10.2□□□□□ -0.78
RFC1-211ENST00000509084 LYSMD4Q5XG99 296 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 PMS2CLQ68D20 193 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 CRTC3Q6UUV7 619 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 Q6ZSR6 202 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 ADAMTSL2Q86TH1 951 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 AMZ2Q86W34 360 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 RGL4Q8IZJ4 473 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 MAML2Q8IZL2 1156 aaPredicted RBP10.2□□□□□ -0.78
RFC1-211ENST00000509084 ANKRD42Q8N9B4 389 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 CCDC63Q8NA47 563 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 GIMAP7Q8NHV1 300 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 RHEBL1Q8TAI7 183 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 SREK1Q8WXA9 508 aaKnown RBP10.2□□□□□ -0.78
RFC1-211ENST00000509084 NELL1Q92832 810 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 FAM136AQ96C01 138 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 LINGO1Q96FE5 620 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 SCYL1Q96KG9 808 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 SLC6A18Q96N87 628 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 OR2M4Q96R27 311 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 MRPL57Q9BQC6 102 aaKnown RBP10.2□□□□□ -0.78
RFC1-211ENST00000509084 ORAI3Q9BRQ5 295 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 DPEP2Q9H4A9 486 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 TFB2MQ9H5Q4 396 aaKnown RBP10.2□□□□□ -0.78
RFC1-211ENST00000509084 COG4Q9H9E3 785 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 ZSCAN32Q9NX65 697 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 SUSD2Q9UGT4 822 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 EIF2B4Q9UI10 523 aaKnown RBP10.2□□□□□ -0.78
RFC1-211ENST00000509084 TMCO1Q9UM00 188 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 RUVBL2Q9Y230 463 aaKnown RBP10.2□□□□□ -0.78
RFC1-211ENST00000509084 TMEM98Q9Y2Y6 226 aa10.2□□□□□ -0.78
RFC1-211ENST00000509084 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.19□□□□□ -0.78
RFC1-211ENST00000509084 SPTY2D1-AS1A0A0U1RR47 76 aa10.19□□□□□ -0.78
RFC1-211ENST00000509084 SLC5A10A0PJK1 596 aa10.19□□□□□ -0.78
RFC1-211ENST00000509084 PABPN1LA6NDY0 278 aaKnown RBP10.19□□□□□ -0.78
RFC1-211ENST00000509084 TMEM202A6NGA9 273 aa10.19□□□□□ -0.78
RFC1-211ENST00000509084 SYCE1LA8MT33 242 aa10.19□□□□□ -0.78
RFC1-211ENST00000509084 H0Y8X5 98 aa10.19□□□□□ -0.78
RFC1-211ENST00000509084 PLIN3O60664 434 aa10.19□□□□□ -0.78
RFC1-211ENST00000509084 GPC4O75487 556 aa10.19□□□□□ -0.78
RFC1-211ENST00000509084 POP7O75817 140 aaKnown RBP10.19□□□□□ -0.78
RFC1-211ENST00000509084 SLCO2B1O94956 709 aa10.19□□□□□ -0.78
RFC1-211ENST00000509084 RASGRP1O95267 797 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms