RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 METRNLQ641Q3 311 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 PWWP2BQ6NUJ5 590 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 C16orf46Q6P387 395 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 C6orf15Q6UXA7 325 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 FAM151BQ6UXP7 276 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 SPOCD1Q6ZMY3 1216 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 ZC3H18Q86VM9 953 aaKnown RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 TRAPPC5Q8IUR0 188 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 RHOT2Q8IXI1 618 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 RHOT1Q8IXI2 618 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 SLC25A41Q8N5S1 370 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 BEND7Q8N7W2 519 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 AVL9Q8NBF6 648 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 SLC38A9Q8NBW4 561 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 DDHD1Q8NEL9 900 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 C9orf43Q8TAL5 461 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 APOBEC4Q8WW27 367 aaKnown RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 KIAA1143Q96AT1 154 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 ELMO2Q96JJ3 720 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 FCRL5Q96RD9 977 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 NRTNQ99748 197 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 MAK16Q9BXY0 300 aaKnown RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 RAB33BQ9H082 229 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 TRIT1Q9H3H1 467 aaKnown RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 STN1Q9H668 368 aaKnown RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 RAD18Q9NS91 495 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 POT1Q9NUX5 634 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 DDX56Q9NY93 547 aaKnown RBP6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 FAM153AQ9UHL3 310 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 PSMD13Q9UNM6 376 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 KCTD3Q9Y597 815 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 ALG6Q9Y672 507 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 ICE1Q9Y2F5 2266 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 PCSK5Q92824 1860 aa6.3□□□□□ -1.4
HMGN1P16-201ENST00000508308 FER1L5A0AVI2 2057 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 OR2AG2A6NM03 316 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 RASSF9O75901 435 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 NDUFA10O95299 355 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 LCA5LO95447 670 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 AGTP01019 485 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 AMD1P17707 334 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 TCN2P20062 427 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 ADRA1AP35348 466 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 SLC1A1P43005 524 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 XIAPP98170 497 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 ERV3-1Q14264 604 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 SLC1A5Q15758 541 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 ZNF658BQ4V348 819 aaPredicted RBP6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 KAZNQ674X7 775 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 IRGCQ6NXR0 463 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 DUS1LQ6P1R4 473 aaKnown RBP6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 FAM199XQ6PEV8 388 aaPredicted RBP6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 TMEM220Q6QAJ8 160 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 AMZ2Q86W34 360 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 TRIM48Q8IWZ4 208 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 RBM12BQ8IXT5 1001 aaKnown RBP6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 KATNAL2Q8IYT4 538 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 LILRA3Q8N6C8 439 aaPredicted RBP6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 BLOC1S5Q8TDH9 187 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 CT55Q8WUE5 264 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 TFB1MQ8WVM0 346 aaKnown RBP6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 KRT35Q92764 455 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 HAUS1Q96CS2 278 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 CXorf40BQ96DE9 158 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 ZDHHC12Q96GR4 267 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 CCDC42Q96M95 316 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 PPM1MQ96MI6 270 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 QKIQ96PU8 341 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 INSM2Q96T92 566 aaPredicted RBP6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 MAP3K3Q99759 626 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 TRIM55Q9BYV6 548 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 DEF6Q9H4E7 631 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 TRABDQ9H4I3 376 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 ANAPC2Q9UJX6 822 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 INTUQ9ULD6 942 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 PLAAQ9Y263 795 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 TP53TG5Q9Y2B4 290 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 SHANK1Q9Y566 2161 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 PCDHGA6Q9Y5G7 932 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 LRBAP50851 2863 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 HIVEP3Q5T1R4 2406 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 PIKFYVEQ9Y2I7 2098 aa6.29□□□□□ -1.4
HMGN1P16-201ENST00000508308 GLYATL1P3A0A0U1RQE8 302 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 RCCD1A6NED2 376 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 AGAP14A8MT82 685 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 PSTPIP1O43586 416 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 SPOPO43791 374 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 KCNJ13O60928 360 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 CREG1O75629 220 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 DNAJB5O75953 348 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 NTRK1P04629 796 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 EBLN1P0CF75 366 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 MTHFD1P11586 935 aaKnown RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 RBL1P28749 1068 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 SPAM1P38567 509 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 RPS18P62269 152 aaKnown RBP6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 MC1RQ01726 317 aa6.28□□□□□ -1.4
HMGN1P16-201ENST00000508308 MPP3Q13368 585 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms