RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 PCDHB3Q9Y5E6 796 aa13.07□□□□□ -0.32
DDX41-206ENST00000506965 MYO9AB2RTY4 2548 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 LRBAP50851 2863 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 OR5K3A6NET4 321 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 APOL1O14791 398 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 RECKO95980 971 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 H2AFZP0C0S5 128 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 TMEM253P0C7T8 217 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 PTPN4P29074 926 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 PBLDP30039 288 aaPredicted RBP13.06□□□□□ -0.32
DDX41-206ENST00000506965 CDKN2BP42772 138 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 MSLNQ13421 630 aaPredicted RBP13.06□□□□□ -0.32
DDX41-206ENST00000506965 PAPD7Q5XG87 772 aaKnown RBP13.06□□□□□ -0.32
DDX41-206ENST00000506965 TMEM220Q6QAJ8 160 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 H2AFVQ71UI9 128 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 D2HGDHQ8N465 521 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 SLC25A41Q8N5S1 370 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 DDHD1Q8NEL9 900 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 ZDHHC12Q96GR4 267 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 RMDN2Q96LZ7 410 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 CHST8Q9H2A9 424 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 C10orf88Q9H8K7 445 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 SPTLC3Q9NUV7 552 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 KCND3Q9UK17 655 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 RARRES3Q9UL19 164 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 LUC7L2Q9Y383 392 aaKnown RBP13.06□□□□□ -0.32
DDX41-206ENST00000506965 MAP4K5Q9Y4K4 846 aa13.06□□□□□ -0.32
DDX41-206ENST00000506965 CROCCQ5TZA2 2017 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 A0A0A6YYK5 440 aaPredicted RBP13.05□□□□□ -0.32
DDX41-206ENST00000506965 SYCE3A1L190 88 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 ARGFXA6NJG6 315 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 C21orf140B9A014 251 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 CEACAM4O75871 244 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 KRT1P04264 644 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 MTHFD1P11586 935 aaKnown RBP13.05□□□□□ -0.32
DDX41-206ENST00000506965 RORAP35398 523 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 MARCKSL1P49006 195 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 PDK1Q15118 436 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 ZNF658BQ4V348 819 aaPredicted RBP13.05□□□□□ -0.32
DDX41-206ENST00000506965 PLEKHS1Q5SXH7 462 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 METRNLQ641Q3 311 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 FAM198BQ6UWH4 519 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 DET1Q7L5Y6 550 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 DAAM2Q86T65 1068 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 AMZ2Q86W34 360 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 VSIG1Q86XK7 387 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 RBM12BQ8IXT5 1001 aaKnown RBP13.05□□□□□ -0.32
DDX41-206ENST00000506965 ZNF567Q8N184 647 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 SIDT2Q8NBJ9 832 aaKnown RBP13.05□□□□□ -0.32
DDX41-206ENST00000506965 CTNNBL1Q8WYA6 563 aaPredicted RBP13.05□□□□□ -0.32
DDX41-206ENST00000506965 UBXN4Q92575 508 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 WWP1Q9H0M0 922 aa13.05□□□□□ -0.32
DDX41-206ENST00000506965 PLEKHB1Q9UF11 243 aaPredicted RBP13.05□□□□□ -0.32
DDX41-206ENST00000506965 TLCD2A6NGC4 264 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 MASP2O00187 686 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 HCRTR1O43613 425 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 SPAM1P38567 509 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 ITGA1P56199 1179 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 FOXL2P58012 376 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 MRPL49Q13405 166 aaKnown RBP13.04□□□□□ -0.32
DDX41-206ENST00000506965 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 RFX6Q8HWS3 928 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 RBMXL3Q8N7X1 1067 aaKnown RBP13.04□□□□□ -0.32
DDX41-206ENST00000506965 CPT1CQ8TCG5 803 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 DTX3LQ8TDB6 740 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
DDX41-206ENST00000506965 DNAJC7Q99615 494 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 NUDT9Q9BW91 350 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 TLR10Q9BXR5 811 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
DDX41-206ENST00000506965 RAD18Q9NS91 495 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 IMP3Q9NV31 184 aaKnown RBP13.04□□□□□ -0.32
DDX41-206ENST00000506965 FAM8A1Q9UBU6 413 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 SLC24A2Q9UI40 661 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 BTRCQ9Y297 605 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 PCDHGA9Q9Y5G4 932 aaKnown RBP13.04□□□□□ -0.32
DDX41-206ENST00000506965 ARL5AQ9Y689 179 aa13.04□□□□□ -0.32
DDX41-206ENST00000506965 CTSBP07858 339 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 CCNYL3P0C7X3 344 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 COL8A1P27658 744 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 CCL11P51671 97 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 XIAPP98170 497 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 DNTTIP2Q5QJE6 756 aaKnown RBP13.03□□□□□ -0.32
DDX41-206ENST00000506965 FNBP1LQ5T0N5 605 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 ZNF385CQ66K41 422 aaPredicted RBP13.03□□□□□ -0.32
DDX41-206ENST00000506965 SYVN1Q86TM6 617 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 GALNT11Q8NCW6 608 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 FDCSPQ8NFU4 85 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 OR1L3Q8NH93 324 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 GDAP1Q8TB36 358 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 BLOC1S5Q8TDH9 187 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 HAUS1Q96CS2 278 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 FCRL4Q96PJ5 515 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 ING2Q9H160 280 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 PDE7BQ9NP56 450 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 HAUS2Q9NVX0 235 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 SMOXQ9NWM0 555 aa13.03□□□□□ -0.32
DDX41-206ENST00000506965 HRASLS2Q9NWW9 162 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms