RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ARPP21Q9UBL0 812 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 TRPC4Q9UBN4 977 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 GAGE2DQ9UEU5 116 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 CPSF3Q9UKF6 684 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 MTF2Q9Y483 593 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 NME7Q9Y5B8 376 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 ANKUB1A6NFN9 424 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 C5orf52A6NGY3 159 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 YDJCA8MPS7 323 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 PPP6CO00743 305 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 CPLX1O14810 134 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 MDM4O15151 490 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 EIF3DO15371 548 aaKnown RBP eCLIP3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 KCNN4O15554 427 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZBTB43O43298 467 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZNF217O75362 1048 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 HMOX1P09601 288 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 CTSAP10619 480 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 UROSP10746 265 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 UGT1A1P22309 533 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 GABRA5P31644 462 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 HNRNPH1P31943 449 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 KIF5BP33176 963 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 PIGAP37287 484 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 EIF2S3P41091 472 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC9A3P48764 834 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 PTH2RP49190 550 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 KIAA1024LP59773 190 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 ID2Q02363 134 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 PRKCZQ05513 592 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM119Q4V9L6 283 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 SETMARQ53H47 684 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 MDH1BQ5I0G3 518 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 DUS1LQ6P1R4 473 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 FIGLAQ6QHK4 219 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 PHLDB2Q86SQ0 1253 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC9B2Q86UD5 537 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 BEST3Q8N1M1 668 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 GCSAMQ8N6F7 178 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZNF611Q8N823 705 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC38A9Q8NBW4 561 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 ANKRD20A12PQ8NF67 263 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 SEMA6DQ8NFY4 1073 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 GPT2Q8TD30 523 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 UTP15Q8TED0 518 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 HASPINQ8TF76 798 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM174Q8WUU8 243 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 TAAR8Q969N4 342 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 SPDL1Q96EA4 605 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 SFXN2Q96NB2 322 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 RUNDC3BQ96NL0 473 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 OR6C1Q96RD1 312 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 HNRNPABQ99729 332 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 OLFM1Q99784 485 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 KXD1Q9BQD3 176 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 HAUS8Q9BT25 410 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZNF350Q9GZX5 532 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 C1orf21Q9H246 121 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 KCNN2Q9H2S1 579 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 FN3KQ9H479 309 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 CNGB3Q9NQW8 809 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 IARS2Q9NSE4 1012 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 DNAJC17Q9NVM6 304 aaKnown RBP3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 ANO10Q9NW15 660 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 COMMD8Q9NX08 183 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 TBC1D7Q9P0N9 293 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 IL19Q9UHD0 177 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMCC3Q9ULS5 477 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 GRIP1Q9Y3R0 1128 aa3.8□□□□□ -1.8
TRAPPC13-208ENST00000505553 RNF103-CHMP3A0A140T963 221 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 KRT87PA6NCN2 255 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 SDR42E2A6NKP2 422 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM86B1E9PN63 330 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 J3QR06 171 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 RNF103O00237 685 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 PTGESO14684 152 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 CAPN9O14815 690 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 TLX3O43711 291 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 PROP1O75360 226 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 TOMM70O94826 608 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 DDHD2O94830 711 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 IFNA2P01563 188 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM86B2P0C5J1 330 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 PLA2G4BP0C869 781 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 PCP11498 1178 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 ITIH1P19827 911 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 ACAT1P24752 427 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 HRH2P25021 359 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 HOXD9P28356 352 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 BDKRB2P30411 391 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 HPDP32754 393 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 STX2P32856 288 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 WNT5AP41221 380 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 APOBEC1P41238 236 aaKnown RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 CD86P42081 329 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 COMPP49747 757 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZNF131P52739 623 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC12A3P55017 1021 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 RPS6KA1Q15418 735 aa3.79□□□□□ -1.8
TRAPPC13-208ENST00000505553 DUSP6Q16828 381 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms