RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, human

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM5-208	ENST00000504489	WASH2P	Q6VEQ5	465 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CYS1	Q717R9	158 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CCDC25	Q86WR0	208 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	DENND6A	Q8IWF6	608 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CNTN4	Q8IWV2	1026 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	PALM2	Q8IXS6	379 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	UNC5B	Q8IZJ1	945 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	BEND7	Q8N7W2	519 aa	Predicted RBP	11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	EIF1AD	Q8N9N8	165 aa	Known RBP	11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	DEFB124	Q8NES8	71 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	GPR156	Q8NFN8	814 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	OR2L2	Q8NH16	312 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	LPGAT1	Q92604	370 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	GLMN	Q92990	594 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CNDP2	Q96KP4	475 aa	Known RBP	11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	APOLD1	Q96LR9	279 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CCM2	Q9BSQ5	444 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	P2RY12	Q9H244	342 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	WASH6P	Q9NQA3	447 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	NCKIPSD	Q9NZQ3	722 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	GULP1	Q9UBP9	304 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	FTSJ1	Q9UET6	329 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	TBC1D29	Q9UFV1	150 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	FBXO5	Q9UKT4	447 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	KCNK6	Q9Y257	313 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	PCDHB1	Q9Y5F3	818 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	PRSS21	Q9Y6M0	314 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	DCHS1	Q96JQ0	3298 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	LY6G6E	A0A0G2JKS1	128 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489		A6NCN8	305 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	OR5K4	A6NMS3	321 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	TNFSF14	O43557	240 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	NOBOX	O60393	691 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	FTH1	P02794	183 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CKMT1A	P12532	417 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	IDS	P22304	550 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	SSTR1	P30872	391 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	RPIA	P49247	311 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	DUSP3	P51452	185 aa	Predicted RBP	11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	MGAT5	Q09328	741 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CTBP1	Q13363	440 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	TRIP6	Q15654	476 aa	Known RBP	11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	SMAD1	Q15797	465 aa	Known RBP	11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	PLA2G4E	Q3MJ16	856 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ZNF658B	Q4V348	819 aa	Predicted RBP	11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	TEDDM1	Q5T9Z0	273 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	AGAP9	Q5VTM2	703 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	METRNL	Q641Q3	311 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ABRAXAS1	Q6UWZ7	409 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	KIAA0408	Q6ZU52	694 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	C3orf62	Q6ZUJ4	267 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	GALNT7	Q86SF2	657 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	C17orf82	Q86X59	251 aa	Predicted RBP	11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	SLC35F3	Q8IY50	421 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ARL10	Q8N8L6	244 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	HM13	Q8TCT9	377 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ZDHHC1	Q8WTX9	485 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	NAT14	Q8WUY8	206 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	C9orf72	Q96LT7	481 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	BIRC8	Q96P09	236 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	DPEP2	Q9H4A9	486 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	OSGEPL1	Q9H4B0	414 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	IARS2	Q9NSE4	1012 aa	Known RBP	11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	EVA1B	Q9NVM1	165 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	GNPTG	Q9UJJ9	305 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ACSL5	Q9ULC5	683 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	DNAJC16	Q9Y2G8	782 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489		U3KQA8	63 aa		11.69	□□□□□ -0.54
PDLIM5-208	ENST00000504489	UBA6	A0AVT1	1052 aa	Predicted RBP	11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489		H3BMM5	538 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	SPAG6	O75602	509 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	EML2	O95834	649 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ESR1	P03372	595 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	F3	P13726	295 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	SLC2A4	P14672	509 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CKMT2	P17540	419 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ACP1	P24666	158 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	PBLD	P30039	288 aa	Predicted RBP	11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	SLC1A2	P43004	574 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	LEPR	P48357	1165 aa	Known RBP	11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	EIF3B	P55884	814 aa	Known RBP	11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	GPX6	P59796	221 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	NFE2L1	Q14494	772 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	NR0B2	Q15466	257 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	C14orf28	Q4W4Y0	310 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ZNF789	Q5FWF6	425 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	PTRHD1	Q6GMV3	140 aa	Known RBP	11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	IYD	Q6PHW0	289 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	XKR5	Q6UX68	686 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CFAP206	Q8IYR0	622 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	NAGS	Q8N159	534 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	KY	Q8NBH2	561 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	OR6C4	Q8NGE1	309 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	TSSK1B	Q9BXA7	367 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	LRRC4C	Q9HCJ2	640 aa		11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	PPAN	Q9NQ55	473 aa	Known RBP	11.68	□□□□□ -0.54
PDLIM5-208	ENST00000504489	PRDM8	Q9NQV8	689 aa		11.68	□□□□□ -0.54

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