RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 KPNA2P52292 529 aaKnown RBP7.53□□□□□ -1.2
NEDD9-208ENST00000504387 SNRPD2P62316 118 aaKnown RBP7.53□□□□□ -1.2
NEDD9-208ENST00000504387 BEX3Q00994 111 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 DSC2Q02487 901 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 UBE3AQ05086 875 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 ILF2Q12905 390 aaKnown RBP7.53□□□□□ -1.2
NEDD9-208ENST00000504387 TRAF3Q13114 568 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 GALNT3Q14435 633 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 NR6A1Q15406 480 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 SMU1Q2TAY7 513 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 NEK5Q6P3R8 708 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-208ENST00000504387 OSTM1Q86WC4 334 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 LYSMD2Q8IV50 215 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 TRIM48Q8IWZ4 208 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 MINDY1Q8N5J2 469 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 B3GALNT2Q8NCR0 500 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 OR52B6Q8NGF0 335 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 OR6Q1Q8NGQ2 317 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 OR13C4Q8NGS5 318 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 OR2T11Q8NH01 316 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 COLEC11Q9BWP8 271 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 TDRD1Q9BXT4 1180 aaKnown RBP7.53□□□□□ -1.2
NEDD9-208ENST00000504387 SLC39A8Q9C0K1 460 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 IKZF5Q9H5V7 419 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 QPCTLQ9NXS2 382 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 RBPJLQ9UBG7 517 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 ITGB1BP2Q9UKP3 347 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 N6AMT1Q9Y5N5 214 aa7.53□□□□□ -1.2
NEDD9-208ENST00000504387 A0A087X1B8 175 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 A0A1W2PP18 115 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 IQCF5A8MTL0 148 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 TLR5O60602 858 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CSF2P04141 144 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PAMP19021 973 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CASP3P42574 277 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PSMD8P48556 350 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 HTR6P50406 440 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 POU4F1Q01851 419 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PAFAH1B3Q15102 231 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 TTC23Q5W5X9 447 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 DENND5AQ6IQ26 1287 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PAQR3Q6TCH7 311 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 USP51Q70EK9 711 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CACTIN-AS1Q8N1I8 211 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PNPT1Q8TCS8 783 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 UBASH3BQ8TF42 649 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 SLC47A1Q96FL8 570 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 ZBED3Q96IU2 234 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 SH3GL1Q99961 368 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 C11orf84Q9BUA3 381 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 EXOSC4Q9NPD3 245 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 TAS2R16Q9NYV7 291 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 VAPAQ9P0L0 249 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 EIF2B4Q9UI10 523 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 IKZF3Q9UKT9 509 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 KIAA1257Q9ULG3 409 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 POLR3HQ9Y535 204 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PCDHB14Q9Y5E9 798 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 ACTL7AQ9Y615 435 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 RGPD3A6NKT7 1758 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 RGPD4Q7Z3J3 1758 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 IGKV6D-21A0A0A0MT36 114 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 MYBPHLA2RUH7 354 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 NPEPPSL1A6NEC2 478 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 MEIS3P2A8K0S8 358 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 BTN3A1O00481 513 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 VIPP01282 170 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 ANXA6P08133 673 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 ALOX5P09917 674 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CXCR2P25025 360 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 ST13P50502 369 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CRISP3P54108 245 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 HERVK_113P63132 956 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CD83Q01151 205 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 SOX4Q06945 474 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CDK5R2Q13319 367 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CLCA4Q14CN2 919 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 FSCN1Q16658 493 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 UAP1L1Q3KQV9 507 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 AASDHQ4L235 1098 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PRSS36Q5K4E3 855 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 SDHAF4Q5VUM1 108 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 IL27RAQ6UWB1 636 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PLPPR4Q7Z2D5 763 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 FBXO39Q8N4B4 442 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PDPRQ8NCN5 879 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 C2CD4AQ8NCU7 369 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 NLGN2Q8NFZ4 835 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 OR2T12Q8NG77 320 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 SCAMP5Q8TAC9 235 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PCNPQ8WW12 178 aaKnown RBP7.52□□□□□ -1.21
NEDD9-208ENST00000504387 CDCA5Q96FF9 252 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 EXOC2Q96KP1 924 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 NPY6RQ99463 290 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 COQ7Q99807 217 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 TUBA1CQ9BQE3 449 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 ERVK-6Q9BXR3 956 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 PARVBQ9HBI1 364 aa7.52□□□□□ -1.21
NEDD9-208ENST00000504387 GLOD4Q9HC38 313 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms