RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 RPL10P27635 214 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 CCR7P32248 378 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 STX2P32856 288 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 PREPP48147 710 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 LEPRP48357 1165 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 RSPO4Q2I0M5 234 aaPredicted RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 RNF187Q5TA31 235 aaPredicted RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 GKN2Q86XP6 184 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 LMNTD2Q8IXW0 634 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 OR2L2Q8NH16 312 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 AENQ8WTP8 325 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 ELMO1Q92556 727 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 ZNF514Q96K75 400 aaPredicted RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 SLC30A3Q99726 388 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 TIMM29Q9BSF4 260 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 EPB41L4BQ9H329 900 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 DPEP2Q9H4A9 486 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 SCHIP1Q9P0W5 487 aaPredicted RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 GNPTGQ9UJJ9 305 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 TSR3Q9UJK0 312 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 PSMD13Q9UNM6 376 aa13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 ZFC3H1O60293 1989 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 ASCC3Q8N3C0 2202 aaKnown RBP13.03□□□□□ -0.32
PDLIM7-212ENST00000504380 PFDN6O15212 129 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 SIGLEC6O43699 453 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 SPAG6O75602 509 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 ZNF883P0CG24 379 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 CHRM3P20309 590 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 PDHA2P29803 388 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 PHBP35232 272 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 CD151P48509 253 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 BOP1Q14137 746 aaKnown RBP13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 SLC29A2Q14542 456 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 SUZ12Q15022 739 aaKnown RBP13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 UAP1Q16222 522 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 ZNF658BQ4V348 819 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 KIAA0408Q6ZU52 694 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 CYS1Q717R9 158 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 TRMT10CQ7L0Y3 403 aaKnown RBP13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 LRRC6Q86X45 466 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 GPATCH11Q8N954 259 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 RHBDD1Q8TEB9 315 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 ZDHHC1Q8WTX9 485 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 UBLCP1Q8WVY7 318 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 CDKL2Q92772 493 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 LINC00615Q96LM1 132 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 AARSD1Q9BTE6 412 aaKnown RBP13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 RAB21Q9UL25 225 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 WDR37Q9Y2I8 494 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 PCDHB1Q9Y5F3 818 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 DNMT3AQ9Y6K1 912 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 CSNK1G3Q9Y6M4 447 aa13.02□□□□□ -0.33
PDLIM7-212ENST00000504380 ARHGEF17Q96PE2 2063 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 ARID1BQ8NFD5 2236 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 PRAMEF33A0A0G2JMD5 474 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 NEMP2A6NFY4 417 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 PRR19A6NJB7 356 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 PDZK1P1A8MUH7 402 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 POC1B-GALNT4F8VUJ3 575 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 FOXD2O60548 495 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 FTH1P02794 183 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 ESR1P03372 595 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 BRAFP15056 766 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 SAT1P21673 171 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 CDKN2DP55273 166 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 MAZP56270 477 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 TIAL1Q01085 375 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 LRP8Q14114 963 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 DBX2Q6ZNG2 339 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 PIM3Q86V86 326 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 SLC26A11Q86WA9 606 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 ZC3HC1Q86WB0 502 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 VRK3Q8IV63 474 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 NAXDQ8IW45 347 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 KYQ8NBH2 561 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 SIDT2Q8NBJ9 832 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 OR4C6Q8NH72 309 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 GABPB2Q8TAK5 448 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 HM13Q8TCT9 377 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 ELMO2Q96JJ3 720 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 WWP1Q9H0M0 922 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 CCDC68Q9H2F9 335 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 ACSS3Q9H6R3 686 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 COG4Q9H9E3 785 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 NLGN3Q9NZ94 848 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 VPS9D1Q9Y2B5 631 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 MED16Q9Y2X0 877 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 MTO1Q9Y2Z2 717 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 PCDHGB2Q9Y5G2 931 aa13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 CFAP20Q9Y6A4 193 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-212ENST00000504380 CHD6Q8TD26 2715 aa13□□□□□ -0.33
PDLIM7-212ENST00000504380 CACNA1GO43497 2377 aa13□□□□□ -0.33
PDLIM7-212ENST00000504380 A0A087WUV0 522 aaPredicted RBP13□□□□□ -0.33
PDLIM7-212ENST00000504380 E5RI56 91 aa13□□□□□ -0.33
PDLIM7-212ENST00000504380 NOBOXO60393 691 aa13□□□□□ -0.33
PDLIM7-212ENST00000504380 SHBGP04278 402 aa13□□□□□ -0.33
PDLIM7-212ENST00000504380 VCLP18206 1134 aa13□□□□□ -0.33
PDLIM7-212ENST00000504380 IDSP22304 550 aa13□□□□□ -0.33
PDLIM7-212ENST00000504380 AOAHP28039 575 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms