RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 AFMIDQ63HM1 303 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 SP5Q6BEB4 398 aaPredicted RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 WDR74Q6RFH5 385 aaPredicted RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 Q71RC1 249 aaPredicted RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 BNIPLQ7Z465 357 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 MRGPREQ86SM8 312 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 SYVN1Q86TM6 617 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 SLC9B2Q86UD5 537 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 PPP1R3BQ86XI6 285 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 TRIM59Q8IWR1 403 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 RHOT1Q8IXI2 618 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 PGBD5Q8N414 524 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 ZBTB2Q8N680 514 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 SIDT2Q8NBJ9 832 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 TMEM35BQ8NCS4 154 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 NAT14Q8WUY8 206 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 ASB11Q8WXH4 323 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 NRGNQ92686 78 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 SMARCE1Q969G3 411 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 NT5C3BQ969T7 300 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 AP2M1Q96CW1 435 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 ECHDC3Q96DC8 303 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 C18orf8Q96DM3 657 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 PGAP3Q96FM1 320 aaPredicted RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 C1orf74Q96LT6 269 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 MAGEB10Q96LZ2 347 aaPredicted RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 MCEEQ96PE7 176 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 PLEKHG4BQ96PX9 1271 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 NRTNQ99748 197 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 MAP3K3Q99759 626 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 DPYSL5Q9BPU6 564 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 ZPBPQ9BS86 351 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 RIOK2Q9BVS4 552 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 TRIM8Q9BZR9 551 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 SLC39A8Q9C0K1 460 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 KLHL25Q9H0H3 589 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 DEF6Q9H4E7 631 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 LIN7BQ9HAP6 207 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 SARS2Q9NP81 518 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 KLC4Q9NSK0 619 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 SOHLH2Q9NX45 425 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 DTLQ9NZJ0 730 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 PDP2Q9P2J9 529 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 APEX2Q9UBZ4 518 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 USP25Q9UHP3 1055 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 TMEM59LQ9UK28 342 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 DNAJC12Q9UKB3 198 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 RCOR1Q9UKL0 485 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 RARRES3Q9UL19 164 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 PADI1Q9ULC6 663 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 PCDHGA9Q9Y5G4 932 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 PCDHGA6Q9Y5G7 932 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 COPG1Q9Y678 874 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 CFAP20Q9Y6A4 193 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 HIVEP3Q5T1R4 2406 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 CCDC78A2IDD5 438 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 LILRA5A6NI73 299 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 C2CD4BA6NLJ0 364 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 C21orf140B9A014 251 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 EEF2KO00418 725 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 TRAFD1O14545 582 aaPredicted RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 ZNHIT1O43257 154 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 LDB2O43679 373 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 DNAJC6O75061 913 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 CPNE3O75131 537 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 CEACAM4O75871 244 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 B3GALT4O96024 378 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 F10P00742 488 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 VIPP01282 170 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 C9P02748 559 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PDHA1P08559 390 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 ANKRD34CP0C6C1 535 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PIRTP0C851 137 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 MED14OSP0DP75 135 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 CYP2A6P11509 494 aaPredicted RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 FGF5P12034 268 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 F3P13726 295 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 CYP11B1P15538 503 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 ZNF8P17098 575 aaPredicted RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 GPD1P21695 349 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 IL4RP24394 825 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PON1P27169 355 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 HTR1EP28566 365 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 KLK7P49862 253 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 SUOXP51687 545 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 VAV2P52735 878 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PER3P56645 1201 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 RPS15P62841 145 aaKnown RBP3.55□□□□□ -1.84
USP46-205ENST00000504078 KRT85P78386 507 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 ID3Q02535 119 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 SLC10A7Q0GE19 358 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 Q0VFX4 171 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 CDC16Q13042 620 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 MTA1Q13330 715 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 STIM1Q13586 685 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 GPR18Q14330 331 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 CDSNQ15517 529 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 EXOC3L4Q17RC7 722 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 PARP15Q460N3 678 aa3.55□□□□□ -1.84
USP46-205ENST00000504078 INO80DQ53TQ3 878 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms