RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 UNC5BQ8IZJ1 945 aa21.61■■□□□ 1.05
LSM6-203ENST00000503982 SYCE1Q8N0S2 351 aa21.61■■□□□ 1.05
LSM6-203ENST00000503982 BEND7Q8N7W2 519 aaPredicted RBP21.61■■□□□ 1.05
LSM6-203ENST00000503982 LRRC57Q8N9N7 239 aa21.61■■□□□ 1.05
LSM6-203ENST00000503982 ZNF514Q96K75 400 aaPredicted RBP21.61■■□□□ 1.05
LSM6-203ENST00000503982 SPATA13Q96N96 652 aa21.61■■□□□ 1.05
LSM6-203ENST00000503982 OR6C1Q96RD1 312 aa21.61■■□□□ 1.05
LSM6-203ENST00000503982 EFHD1Q9BUP0 239 aa21.61■■□□□ 1.05
LSM6-203ENST00000503982 ULBP3Q9BZM4 244 aa21.61■■□□□ 1.05
LSM6-203ENST00000503982 TRIT1Q9H3H1 467 aaKnown RBP21.61■■□□□ 1.05
LSM6-203ENST00000503982 PACSIN2Q9UNF0 486 aaPredicted RBP21.61■■□□□ 1.05
LSM6-203ENST00000503982 KCTD3Q9Y597 815 aa21.61■■□□□ 1.05
LSM6-203ENST00000503982 CFAP20Q9Y6A4 193 aaKnown RBP21.61■■□□□ 1.05
LSM6-203ENST00000503982 DNMT3AQ9Y6K1 912 aaPredicted RBP21.61■■□□□ 1.05
LSM6-203ENST00000503982 GAPDHSO14556 408 aaPredicted RBP21.6■■□□□ 1.05
LSM6-203ENST00000503982 SRP72O76094 671 aaKnown RBP21.6■■□□□ 1.05
LSM6-203ENST00000503982 PRKAR1AP10644 381 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 SFTPCP11686 197 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 KRT33BQ14525 404 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 RPE65Q16518 533 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 FAM83HQ6ZRV2 1179 aaPredicted RBP21.6■■□□□ 1.05
LSM6-203ENST00000503982 TTC13Q8NBP0 860 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 OR13C4Q8NGS5 318 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 GPR150Q8NGU9 434 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 NAT14Q8WUY8 206 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 ALG3Q92685 438 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 C12orf66Q96MD2 445 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 GORASP1Q9BQQ3 440 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 SLC12A9Q9BXP2 914 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 WWP1Q9H0M0 922 aa21.6■■□□□ 1.05
LSM6-203ENST00000503982 ZNF768Q9H5H4 540 aaKnown RBP21.6■■□□□ 1.05
LSM6-203ENST00000503982 ZNF462Q96JM2 2506 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 LOC101059948A0A1B0GTJ6 334 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 PRR19A6NJB7 356 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 KRT86O43790 486 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 KIF1CO43896 1103 aaKnown RBP21.59■■□□□ 1.05
LSM6-203ENST00000503982 ZNF189O75820 626 aaPredicted RBP21.59■■□□□ 1.05
LSM6-203ENST00000503982 FTCDO95954 541 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 ITGALP20701 1170 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 ARL4DP49703 201 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 SH3BP2P78314 561 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 DMPKQ09013 629 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 KLHL35Q6PF15 583 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 BORAQ6PGQ7 559 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 RANBP10Q6VN20 620 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 FAM96AQ9H5X1 160 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 SMOXQ9NWM0 555 aa21.59■■□□□ 1.05
LSM6-203ENST00000503982 CFAP99D6REC4 459 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 TOX3O15405 576 aaPredicted RBP21.58■■□□□ 1.05
LSM6-203ENST00000503982 SLC35G4P0C7Q5 338 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 ADRA1AP35348 466 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 ABHD18Q0P651 414 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 SEPT6Q14141 434 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 ARMC6Q6NXE6 501 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 CYB5D1Q6P9G0 228 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 TIPARPQ7Z3E1 657 aaKnown RBP21.58■■□□□ 1.05
LSM6-203ENST00000503982 ESX1Q8N693 406 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 SIDT2Q8NBJ9 832 aaKnown RBP21.58■■□□□ 1.05
LSM6-203ENST00000503982 ULK4Q96C45 1275 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 STAMBPL1Q96FJ0 436 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 KCNF1Q9H3M0 494 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 SIDT1Q9NXL6 827 aaKnown RBP21.58■■□□□ 1.05
LSM6-203ENST00000503982 CFAP46Q8IYW2 2715 aa21.58■■□□□ 1.05
LSM6-203ENST00000503982 MGAT4DA6NG13 374 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 MIF4GDA9UHW6 222 aaKnown RBP21.57■■□□□ 1.04
LSM6-203ENST00000503982 KIAA0754O94854 1291 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 POLBP06746 335 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 MTHFD1P11586 935 aaKnown RBP21.57■■□□□ 1.04
LSM6-203ENST00000503982 HADHAP40939 763 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 ZRANB3Q5FWF4 1079 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 DUS1LQ6P1R4 473 aaKnown RBP21.57■■□□□ 1.04
LSM6-203ENST00000503982 C16orf46Q6P387 395 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 PRSS42Q7Z5A4 293 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 TAB3Q8N5C8 712 aaPredicted RBP21.57■■□□□ 1.04
LSM6-203ENST00000503982 FAM71DQ8N9W8 422 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 ALS2CR12Q96Q35 445 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 LNPEPQ9UIQ6 1025 aa21.57■■□□□ 1.04
LSM6-203ENST00000503982 TMEM184BQ9Y519 407 aaPredicted RBP21.57■■□□□ 1.04
LSM6-203ENST00000503982 UBA6A0AVT1 1052 aaPredicted RBP21.56■■□□□ 1.04
LSM6-203ENST00000503982 PYCARD-AS1I3L0S3 204 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 CCL22O00626 93 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 NKX2-8O15522 239 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 CCR10P46092 362 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 NFKB2Q00653 900 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 METRNLQ641Q3 311 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 C6orf15Q6UXA7 325 aaPredicted RBP21.56■■□□□ 1.04
LSM6-203ENST00000503982 TAS2R42Q7RTR8 314 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 OOSP2Q86WS3 158 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 PPP1R3BQ86XI6 285 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 CFAP206Q8IYR0 622 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 GALNT6Q8NCL4 622 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 OR2L2Q8NH16 312 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 SLC45A3Q96JT2 553 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 CATSPER2Q96P56 530 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 INSM2Q96T92 566 aaPredicted RBP21.56■■□□□ 1.04
LSM6-203ENST00000503982 COPS8Q99627 209 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 FEZ2Q9UHY8 353 aaPredicted RBP21.56■■□□□ 1.04
LSM6-203ENST00000503982 ACSL5Q9ULC5 683 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 RPS6KL1Q9Y6S9 549 aa21.56■■□□□ 1.04
LSM6-203ENST00000503982 HELZ2Q9BYK8 2649 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms