RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 C3orf20Q8ND61 904 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 KIAA1524Q8TCG1 905 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 NUS1Q96E22 293 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 SMIM14Q96QK8 99 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 WNT10AQ9GZT5 417 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 CLSTN2Q9H4D0 955 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 WDR26Q9H7D7 661 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 ATP13A3Q9H7F0 1226 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 PDFQ9HBH1 243 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 COPG2Q9UBF2 871 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 B4GALT6Q9UBX8 382 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 KLHL3Q9UH77 587 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 SUFUQ9UMX1 484 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 NTNG1Q9Y2I2 539 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 TMEM98Q9Y2Y6 226 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 TMEM184BQ9Y519 407 aaPredicted RBP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 RPS6KL1Q9Y6S9 549 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 DGKBQ9Y6T7 804 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 ANKRD36A6QL64 1941 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 CXorf51AA0A1B0GTR3 108 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PIPSLA2A3N6 862 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 A6NCN8 305 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ZNF503-AS2A6NEH8 195 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ARHGAP42A6NI28 874 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 WASH4PA8MWX3 477 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PPM1DO15297 605 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 NUDT21O43809 227 aaKnown RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 SLITRK5O94991 958 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ASMTLO95671 621 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 CPP00450 1065 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 TPM2P07951 284 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 CELA3AP09093 270 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 COX6B1P14854 86 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ZNF28P17035 718 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ERCC2P18074 760 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 TNFAIP3P21580 790 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PSMA2P25787 234 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 EEF1GP26641 437 aaKnown RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ERCC5P28715 1186 aaPredicted RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 GDNFP39905 211 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ADCY8P40145 1251 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ETV3P41162 512 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ACTR1BP42025 376 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 SUOXP51687 545 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ZNF143P52747 638 aaPredicted RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ART1P52961 327 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 JAM2P57087 298 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ACTR1AP61163 376 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 MAXP61244 160 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 LTBQ06643 244 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 SLC10A7Q0GE19 358 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ILF3Q12906 894 aaKnown RBP eCLIP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 SLBPQ14493 270 aaKnown RBP eCLIP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 GRM3Q14832 879 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 KRT31Q15323 416 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 CNGA3Q16281 694 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 MLANAQ16655 118 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 SKOR2Q2VWA4 1001 aaPredicted RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 FKBP15Q5T1M5 1219 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 BRAT1Q6PJG6 821 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 LRFN4Q6PJG9 635 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 TRIM72Q6ZMU5 477 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 RFLNAQ6ZTI6 216 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 Q71RC1 249 aaPredicted RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 DPPA4Q7L190 304 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 TAOK1Q7L7X3 1001 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 CXXC5Q7LFL8 322 aaKnown RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 HSD11B1LQ7Z5J1 315 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 THAP5Q7Z6K1 395 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 TSPAN33Q86UF1 283 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PHF13Q86YI8 300 aaPredicted RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ARHGAP12Q8IWW6 846 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 NAGSQ8N159 534 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 CCDC112Q8NEF3 446 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 NEK11Q8NG66 645 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 HCAR2Q8TDS4 363 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PNPLA2Q96AD5 504 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PLPPR2Q96GM1 343 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 AHCYL2Q96HN2 611 aaKnown RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 SGSM3Q96HU1 749 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 KIRREL1Q96J84 757 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ZNF641Q96N77 438 aaPredicted RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PEBP4Q96S96 227 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 MIPEPQ99797 713 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 AGPAT1Q99943 283 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 SNRNP25Q9BV90 132 aaKnown RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 GSDMCQ9BYG8 508 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 TWSG1Q9GZX9 223 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 NUP62CLQ9H1M0 184 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 RETREG1Q9H6L5 497 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 LRRC19Q9H756 370 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PHPT1Q9NRX4 125 aaPredicted RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 TAS2R14Q9NYV8 317 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 TAAR2Q9P1P5 351 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 OSGIN2Q9Y236 505 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 NEU2Q9Y3R4 380 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PRKAB1Q9Y478 270 aa5.47□□□□□ -1.53
SPTA1-209ENST00000498708 PCDHGA9Q9Y5G4 932 aaKnown RBP5.47□□□□□ -1.53
SPTA1-209ENST00000498708 ST14Q9Y5Y6 855 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms