RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CFHR3Q02985 330 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 ITIH3Q06033 890 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 KIF5AQ12840 1032 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 SSPNQ14714 243 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 GRM7Q14831 915 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 MAPK11Q15759 364 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 LRRC23Q53EV4 343 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-224ENST00000497488 LBHQ53QV2 105 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-224ENST00000497488 HSP90AB3PQ58FF7 597 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 SGO1Q5FBB7 561 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 C10orf76Q5T2E6 689 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 STXBP5Q5T5C0 1151 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 ATAD3BQ5T9A4 648 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 KIRREL2Q6UWL6 708 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 WDR88Q6ZMY6 472 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 Q6ZWC4 215 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 PIGWQ7Z7B1 504 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 ADAMTSL2Q86TH1 951 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 WDR5BQ86VZ2 330 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 TMEM173Q86WV6 379 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-224ENST00000497488 CAMK1DQ8IU85 385 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 DNAJC10Q8IXB1 793 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 KBTBD2Q8IY47 623 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 SLC35F3Q8IY50 421 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 ZCCHC7Q8N3Z6 543 aaKnown RBP5.99□□□□□ -1.45
BRCA1-224ENST00000497488 L3MBTL4Q8NA19 623 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 OR4N2Q8NGD1 307 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 FEZF2Q8TBJ5 459 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 HDAC7Q8WUI4 952 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 ATL1Q8WXF7 558 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 LPIN2Q92539 896 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 SLC25A28Q96A46 364 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 GIMAP5Q96F15 307 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 ZC3HAV1LQ96H79 300 aaKnown RBP5.99□□□□□ -1.45
BRCA1-224ENST00000497488 COG3Q96JB2 828 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 CNOT6LQ96LI5 555 aaKnown RBP5.99□□□□□ -1.45
BRCA1-224ENST00000497488 TCEANC2Q96MN5 208 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 GSDMAQ96QA5 445 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 LRRC37BQ96QE4 947 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 TMEM79Q9BSE2 394 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 TPPP3Q9BW30 176 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 TEX101Q9BY14 249 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 PIGMQ9H3S5 423 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 RPF1Q9H9Y2 349 aaKnown RBP5.99□□□□□ -1.45
BRCA1-224ENST00000497488 CHMP1AQ9HD42 196 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-224ENST00000497488 SLCO1C1Q9NYB5 712 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 DNPEPQ9ULA0 475 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 MTUS1Q9ULD2 1270 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 TNFSF13BQ9Y275 285 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 CHST2Q9Y4C5 530 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 DAPK1P53355 1430 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 UBE4BO95155 1302 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 SPATA31A1Q5TZJ5 1347 aa5.99□□□□□ -1.45
BRCA1-224ENST00000497488 C3P01024 1663 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 TRGV11A0A075B6L2 103 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 TLR4O00206 839 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 KLK8O60259 260 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 PEX10O60683 326 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 KIAA0754O94854 1291 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 PGLSO95336 258 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 ICAM1P05362 532 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 ETFAP13804 333 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 FUT1P19526 365 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 NR1D1P20393 614 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 ACAT1P24752 427 aaKnown RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 YWHAQP27348 245 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 PSMA5P28066 241 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 CLCNKBP51801 687 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 SRP54P61011 504 aaKnown RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 SREBF2Q12772 1141 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 SPP2Q13103 211 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 TNK1Q13470 666 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 NAE1Q13564 534 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 PDE7AQ13946 482 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 PNLIPRP3Q17RR3 467 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 SPATA46Q5T0L3 261 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 NAIF1Q69YI7 327 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 PAPD4Q6PIY7 484 aaKnown RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 MACC1Q6ZN28 852 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 VASH2Q86V25 355 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 IGFN1Q86VF2 1251 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 NBPF5PQ86XG9 351 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 ZDHHC23Q8IYP9 409 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 ZBTB2Q8N680 514 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 GJC3Q8NFK1 279 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 BBS10Q8TAM1 723 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 ANKRD49Q8WVL7 239 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 WASF1Q92558 559 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 FBXL8Q96CD0 374 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 AP2M1Q96CW1 435 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 CCDC51Q96ER9 411 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 OTUB1Q96FW1 271 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 BOD1Q96IK1 185 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 ACOX2Q99424 681 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 PLA2G12BQ9BX93 195 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 POLR1EQ9GZS1 481 aaKnown RBP5.98□□□□□ -1.45
BRCA1-224ENST00000497488 RAB33BQ9H082 229 aa5.98□□□□□ -1.45
BRCA1-224ENST00000497488 LSG1Q9H089 658 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms