RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 HDHD2Q9H0R4 259 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 EVA1AQ9H8M9 152 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ZDHHC18Q9NUE0 388 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PLCXD1Q9NUJ7 323 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 THUMPD1Q9NXG2 353 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 FEM1BQ9UK73 627 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PLLPQ9Y342 182 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 NR2E1Q9Y466 385 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CSNK1G3Q9Y6M4 447 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 IFT140Q96RY7 1462 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CLIP1P30622 1438 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 KIAA1217Q5T5P2 1943 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 BCLAF3A2AJT9 711 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 URADA6NGE7 173 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC15A5A6NIM6 579 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CLDN4O14493 209 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TXNDC9O14530 226 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 WNT9AO14904 365 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PFKFB2O60825 505 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 HSF2BPO75031 334 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 N4BP1O75113 896 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 BCAS1O75363 584 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RPP40O75818 363 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CIB2O75838 187 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RSL1D1O76021 490 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RPP14O95059 124 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ZBTB11O95625 1053 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LIPFP07098 398 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OR4E1P0C645 316 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SPATA31D3P0C874 917 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OCM2P0CE71 109 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OCMP0CE72 109 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RNF224P0DH78 156 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ENO3P13929 434 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 F8A1P23610 371 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CMA1P23946 247 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CHRNA5P30532 468 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ARL3P36405 182 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CDKN1BP46527 198 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RASSF2P50749 326 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ARSEP51690 589 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CLCNKBP51801 687 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF41P51814 821 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 HNRNPMP52272 730 aaKnown RBP eCLIP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CAPZA1P52907 286 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RAD23AP54725 363 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ANTXR2P58335 489 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 UBE2HP62256 183 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ALDH6A1Q02252 535 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 GUCY2DQ02846 1103 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MAMLD1Q13495 774 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 GCKRQ14397 625 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TGFBIQ15582 683 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 GPR19Q15760 415 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TBCEQ15813 527 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 STX1AQ16623 288 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM83EQ2M2I3 478 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PGS1Q32NB8 556 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 EDRF1Q3B7T1 1238 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ANO6Q4KMQ2 910 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM119Q4V9L6 283 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 EPC2Q52LR7 807 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 C6orf10Q5SRN2 563 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 BROXQ5VW32 411 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MLIPQ5VWP3 458 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC9A4Q6AI14 798 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TTI2Q6NXR4 508 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 KLHDC10Q6PID8 442 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SPATA31D4Q6ZUB0 917 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LINC00523Q86TU6 105 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 HPS6Q86YV9 775 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SIAH1Q8IUQ4 282 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 KBTBD2Q8IY47 623 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 NAGSQ8N159 534 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LNX2Q8N448 690 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM109AQ8N4B1 249 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TERB1Q8NA31 727 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 BHLHE22Q8NFJ8 381 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OR8K5Q8NH50 307 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 UBA3Q8TBC4 463 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 AUTS2Q8WXX7 1259 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 FBXO32Q969P5 355 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 NTAN1Q96AB6 310 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 FOXRED1Q96CU9 486 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MBD6Q96DN6 1003 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM120BQ96EK7 910 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 INPP4AQ96PE3 977 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CSPG4P5Q96PW8 444 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 C12orf57Q99622 126 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 FAM118BQ9BPY3 351 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LBHD1Q9BQE6 289 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM79Q9BSE2 394 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TEX12Q9BXU0 123 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ITPAQ9BY32 194 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PARD6GQ9BYG4 376 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 GPR63Q9BZJ6 419 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RACGAP1Q9H0H5 632 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OPN3Q9H1Y3 402 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MMP27Q9H306 513 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PRDM12Q9H4Q4 367 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms