RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CCL27Q9Y4X3 112 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 SNX9Q9Y5X1 595 aa3.63□□□□□ -1.83
CLK1-214ENST00000496205 LOC100509620A0A075B734 347 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 A0A0U1RQJ8 604 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 HEPACAM2A8MVW5 462 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 MID1O15344 667 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 KCNN4O15554 427 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 UMODP07911 640 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 MYBL1P10243 752 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 S1PR1P21453 382 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 KCNA5P22460 613 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 OAS2P29728 719 aaKnown RBP3.62□□□□□ -1.83
CLK1-214ENST00000496205 HOXD3P31249 432 aaPredicted RBP3.62□□□□□ -1.83
CLK1-214ENST00000496205 GABRA5P31644 462 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 LMAN1P49257 510 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 CLCNKAP51800 687 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 ZNF41P51814 821 aaPredicted RBP3.62□□□□□ -1.83
CLK1-214ENST00000496205 ART1P52961 327 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 CD81P60033 236 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 CRYZQ08257 329 aaKnown RBP3.62□□□□□ -1.83
CLK1-214ENST00000496205 MEP1AQ16819 746 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 MRGPRG-AS1Q2M3A8 158 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 CRY2Q49AN0 593 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 KLHL26Q53HC5 615 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 IL27RAQ6UWB1 636 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.62□□□□□ -1.83
CLK1-214ENST00000496205 TPRG1Q6ZUI0 275 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 INTS8Q75QN2 995 aaKnown RBP3.62□□□□□ -1.83
CLK1-214ENST00000496205 SLFN11Q7Z7L1 901 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 FJX1Q86VR8 437 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 VSIG1Q86XK7 387 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 EPHX4Q8IUS5 362 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 ODF3L1Q8IXM7 274 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 C1orf87Q8N0U7 546 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 ZNF114Q8NC26 417 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 OR10S1Q8NGN2 331 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 SPATA17Q96L03 361 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 FER1L6-AS2Q96M78 137 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 MTERF1Q99551 399 aaKnown RBP3.62□□□□□ -1.83
CLK1-214ENST00000496205 C16orf70Q9BSU1 422 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 ABHD6Q9BV23 337 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 TM6SF1Q9BZW5 370 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 CSTL1Q9H114 145 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 IL25Q9H293 177 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 SLA2Q9H6Q3 261 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 ZWILCHQ9H900 591 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 OCIAD1Q9NX40 245 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 RHCGQ9UBD6 479 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 KCNG2Q9UJ96 466 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 DBNLQ9UJU6 430 aaKnown RBP3.62□□□□□ -1.83
CLK1-214ENST00000496205 FBXL2Q9UKC9 423 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 KCNS2Q9ULS6 477 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 LOXL2Q9Y4K0 774 aa3.62□□□□□ -1.83
CLK1-214ENST00000496205 PDS5AQ29RF7 1337 aaKnown RBP3.62□□□□□ -1.83
CLK1-214ENST00000496205 ZNF644Q9H582 1327 aaPredicted RBP3.62□□□□□ -1.83
CLK1-214ENST00000496205 KIF26BQ2KJY2 2108 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 A0A0B4J293 547 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 TCRBV21S2A2A0A5A6 115 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 C5orf60A6NFR6 353 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 ZNF587BE7ETH6 402 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 TMEM178BH3BS89 294 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 CLGNO14967 610 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 TO15178 435 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 RFPL2O75678 378 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 SERPINI2O75830 405 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 LINC00271P0C7V0 271 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 MYOD1P15172 320 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 ITGA2P17301 1181 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 CYP11B2P19099 503 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 NR2F2P24468 414 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 SIRPAP78324 504 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 COG7P83436 770 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 ZNF155Q12901 538 aaPredicted RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 XKR9Q5GH70 373 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 DHRS7BQ6IAN0 325 aaPredicted RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 TRAT1Q6PIZ9 186 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 DNAJB7Q7Z6W7 309 aaPredicted RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 SATL1Q86VE3 508 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 PM20D2Q8IYS1 436 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 EMC1Q8N766 993 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 PI4KAP1Q8N8J0 262 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 OR2AJ1Q8NGZ0 328 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 UTP15Q8TED0 518 aaKnown RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 SLC20A1Q8WUM9 679 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 SLC38A5Q8WUX1 472 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 TMED6Q8WW62 240 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 MRPS27Q92552 414 aaKnown RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 ABTB1Q969K4 478 aaPredicted RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 RMDN1Q96DB5 314 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 ERLEC1Q96DZ1 483 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 CDHR1Q96JP9 859 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 C3orf30Q96M34 536 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 ZNF582Q96NG8 517 aaPredicted RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 SEMA3CQ99985 751 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 ADPGKQ9BRR6 497 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 NAA11Q9BSU3 229 aaPredicted RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 MRPL9Q9BYD2 267 aaKnown RBP3.61□□□□□ -1.83
CLK1-214ENST00000496205 TMEM39BQ9GZU3 492 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 MMP27Q9H306 513 aa3.61□□□□□ -1.83
CLK1-214ENST00000496205 PRMT7Q9NVM4 692 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms