RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 OGNP20774 298 aaKnown RBP19.06■□□□□ 0.64
HDAC4-212ENST00000495497 FMO4P31512 558 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 SLC1A2P43004 574 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 EIF3BP55884 814 aaKnown RBP19.06■□□□□ 0.64
HDAC4-212ENST00000495497 CAV1Q03135 178 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 TYSND1Q2T9J0 566 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 ZNF658BQ4V348 819 aaPredicted RBP19.06■□□□□ 0.64
HDAC4-212ENST00000495497 GLE1Q53GS7 698 aaKnown RBP19.06■□□□□ 0.64
HDAC4-212ENST00000495497 METRNLQ641Q3 311 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 STEAP4Q687X5 459 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 CAPN12Q6ZSI9 719 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 CCDC25Q86WR0 208 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 ZNF761Q86XN6 746 aaPredicted RBP19.06■□□□□ 0.64
HDAC4-212ENST00000495497 KRT222Q8N1A0 295 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 LPGAT1Q92604 370 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 WWP1Q9H0M0 922 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 L2HGDHQ9H9P8 463 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 ZNF624Q9P2J8 865 aaPredicted RBP19.06■□□□□ 0.64
HDAC4-212ENST00000495497 SLC17A6Q9P2U8 582 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 CRYL1Q9Y2S2 319 aa19.06■□□□□ 0.64
HDAC4-212ENST00000495497 MED19A0JLT2 244 aaPredicted RBP19.05■□□□□ 0.64
HDAC4-212ENST00000495497 RHPN2P1A8MT19 583 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 PRMT5O14744 637 aaPredicted RBP19.05■□□□□ 0.64
HDAC4-212ENST00000495497 S1PR4O95977 384 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 SLC19A1P41440 591 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 PREPP48147 710 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 CARSP49589 748 aaKnown RBP19.05■□□□□ 0.64
HDAC4-212ENST00000495497 MPP1Q00013 466 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 ILKQ13418 452 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 BIRC2Q13490 618 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 CTSL3PQ5NE16 218 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 AGAP9Q5VTM2 703 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 TRMT10BQ6PF06 316 aaKnown RBP19.05■□□□□ 0.64
HDAC4-212ENST00000495497 ABRAXAS1Q6UWZ7 409 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 MARCH9Q86YJ5 346 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 CCNJLQ8IV13 435 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 SPDYE1Q8NFV5 336 aaPredicted RBP19.05■□□□□ 0.64
HDAC4-212ENST00000495497 HM13Q8TCT9 377 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 ADAMTS14Q8WXS8 1223 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 IFT81Q8WYA0 676 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 ELMO1Q92556 727 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 NAT6Q93015 286 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 SYNDIG1Q9H7V2 258 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 COG4Q9H9E3 785 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 ZDHHC18Q9NUE0 388 aa19.05■□□□□ 0.64
HDAC4-212ENST00000495497 ARHGEF17Q96PE2 2063 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 KIR2DS5A0A0G2JLQ3 304 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 A0A0G2JNG1 304 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 C17orf113A0A1B0GUU1 675 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 KIR2DS3K7RE56 304 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 NUDT21O43809 227 aaKnown RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 HYAL3O43820 417 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 OPA1O60313 960 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 TRIM16O95361 564 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 FTH1P02794 183 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 GP1BAP07359 652 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 SLC2A4P14672 509 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 SPINK2P20155 84 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 RPS3P23396 243 aaKnown RBP eCLIP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 PDHA2P29803 388 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 CSE1LP55060 971 aaKnown RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 OR1D5P58170 312 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 CCL7P80098 99 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 INSM1Q01101 510 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 HHEXQ03014 270 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 CBLBQ13191 982 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 KIR2DS5Q14953 304 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 PTRHD1Q6GMV3 140 aaKnown RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 WASH2PQ6VEQ5 465 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 RAB44Q7Z6P3 723 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 SLC9B2Q86UD5 537 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 OR6C4Q8NGE1 309 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 PYROXD1Q8WU10 500 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 CERS2Q96G23 380 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 BIRC8Q96P09 236 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 INSM2Q96T92 566 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 TCF12Q99081 682 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 ABCG4Q9H172 646 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 VPS37BQ9H9H4 285 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 PPANQ9NQ55 473 aaKnown RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 WASH6PQ9NQA3 447 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 FAM114A2Q9NRY5 505 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 CPNE7Q9UBL6 633 aa19.04■□□□□ 0.64
HDAC4-212ENST00000495497 CFAP20Q9Y6A4 193 aaKnown RBP19.04■□□□□ 0.64
HDAC4-212ENST00000495497 OR5K4A6NMS3 321 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 QSOX1O00391 747 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 EIF3HO15372 352 aaKnown RBP eCLIP19.03■□□□□ 0.64
HDAC4-212ENST00000495497 B4GAT1O43505 415 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 HAUS5O94927 633 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 ADRB1P08588 477 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 RHOXF2BP0C7M4 288 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 XRCC1P18887 633 aaPredicted RBP19.03■□□□□ 0.64
HDAC4-212ENST00000495497 ALDH4A1P30038 563 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 CCR7P32248 378 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 UBE2IP63279 158 aaKnown RBP19.03■□□□□ 0.64
HDAC4-212ENST00000495497 E2F1Q01094 437 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 BOP1Q14137 746 aaKnown RBP19.03■□□□□ 0.64
HDAC4-212ENST00000495497 RPE65Q16518 533 aa19.03■□□□□ 0.64
HDAC4-212ENST00000495497 RNF187Q5TA31 235 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms