RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 TMEM35AQ53FP2 167 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 NT5DC1Q5TFE4 455 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 OR5M10Q6IEU7 315 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 PGBD2Q6P3X8 592 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 FKBP9P1Q75LS8 142 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 SSX9Q7RTT3 188 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 ZNF551Q7Z340 670 aaPredicted RBP9.23□□□□□ -0.93
RPSA-209ENST00000495394 SNX20Q7Z614 316 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 HORMAD1Q86X24 394 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 OFCC1Q8IZS5 231 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 PPM1KQ8N3J5 372 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 BPIFCQ8NFQ6 507 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 EDAQ92838 391 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 ELP4Q96EB1 424 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 PTCD3Q96EY7 689 aaKnown RBP9.23□□□□□ -0.93
RPSA-209ENST00000495394 LINGO1Q96FE5 620 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 SH2D3AQ9BRG2 576 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 CNPPD1Q9BV87 410 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 GSDMCQ9BYG8 508 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 POFUT1Q9H488 388 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 ST6GALNAC4Q9H4F1 302 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 ARMC7Q9H6L4 198 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 ADARB2Q9NS39 739 aaKnown RBP9.23□□□□□ -0.93
RPSA-209ENST00000495394 CLEC5AQ9NY25 188 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 NKIRAS1Q9NYS0 192 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 SMARCAL1Q9NZC9 954 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 ANKMY1Q9P2S6 941 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 GNPTGQ9UJJ9 305 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 POMT1Q9Y6A1 747 aa9.23□□□□□ -0.93
RPSA-209ENST00000495394 C12orf71A8MTZ7 269 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 POTECB2RU33 542 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 TSPAN4O14817 238 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 FKTNO75072 461 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 KRT36O76013 467 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 RHOBTB1O94844 696 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 PGK1P00558 417 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 EPOP01588 193 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 PTNP21246 168 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 PRDX5P30044 214 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 EPHX2P34913 555 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 GPX4P36969 197 aaPredicted RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 CRATP43155 626 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 SYKP43405 635 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ACTBP60709 375 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ACTA2P62736 377 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ACTG1P63261 375 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ACTG2P63267 376 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ACTC1P68032 377 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ACTA1P68133 377 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 KCNMB1Q16558 191 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 MOGAT2Q3SYC2 334 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 KLHL12Q53G59 568 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 LBHQ53QV2 105 aaPredicted RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 FBXO47Q5MNV8 452 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 TCEAL6Q6IPX3 200 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 PET117Q6UWS5 81 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ZPBP2Q6X784 338 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 FRA10AC1Q70Z53 315 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 MAEAQ7L5Y9 396 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ANKS1BQ7Z6G8 1248 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 BIVMQ86UB2 503 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 IQCHQ86VS3 1027 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 PPP1R3BQ86XI6 285 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ULK2Q8IYT8 1036 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ZNF596Q8TC21 504 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 PRPF31Q8WWY3 499 aaKnown RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 TESCQ96BS2 214 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 MRPL38Q96DV4 380 aaKnown RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 TPD52L3Q96J77 140 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 FEM1CQ96JP0 617 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 KLHL5Q96PQ7 755 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 RANBP3Q9H6Z4 567 aaPredicted RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 EIF2B3Q9NR50 452 aaKnown RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 PNPLA3Q9NST1 481 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 DDX43Q9NXZ2 648 aaKnown RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 LRFN1Q9P244 771 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 TSPAN16Q9UKR8 245 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ANGEL1Q9UNK9 670 aaKnown RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 SLC27A5Q9Y2P5 690 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ASTN2O75129 1339 aaPredicted RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 CCT8L1PA6NM43 557 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 TTLL8A6PVC2 850 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 E5RI56 91 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 SPINT1O43278 529 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ADAM20O43506 726 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 HS6ST1O60243 411 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ABCB7O75027 752 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 AHSA1O95433 338 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 PDGFBP01127 241 aaPredicted RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 CTSSP25774 331 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 DDX6P26196 483 aaKnown RBP eCLIP9.22□□□□□ -0.93
RPSA-209ENST00000495394 OR1E1P30953 314 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 TECP42680 631 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 OMPP47874 163 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 BMXP51813 675 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 SOX10P56693 466 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 PRPS1P60891 318 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 DBPQ10586 325 aaPredicted RBP9.22□□□□□ -0.93
RPSA-209ENST00000495394 MERTKQ12866 999 aa9.22□□□□□ -0.93
RPSA-209ENST00000495394 ILF2Q12905 390 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms