RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TMEM220Q6QAJ8 160 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 DSELQ8IZU8 1212 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 IQCKQ8N0W5 287 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 CARFQ8N187 725 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 BEND7Q8N7W2 519 aaPredicted RBP13.91□□□□□ -0.18
VARS-228ENST00000495010 Q8NA96 180 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 ADAMTS17Q8TE56 1095 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 C5orf34Q96MH7 638 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 LRFN5Q96NI6 719 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 RNF157Q96PX1 679 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 LATS2Q9NRM7 1088 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.91□□□□□ -0.18
VARS-228ENST00000495010 LCMT1Q9UIC8 334 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 TMPRSS11EQ9UL52 423 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 CFAP20Q9Y6A4 193 aaKnown RBP13.91□□□□□ -0.18
VARS-228ENST00000495010 DNMT3AQ9Y6K1 912 aaPredicted RBP13.91□□□□□ -0.18
VARS-228ENST00000495010 CREBBPQ92793 2442 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 LRRD1A4D1F6 860 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 OR2AG2A6NM03 316 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 APOL1O14791 398 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 AURKAO14965 403 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 PPP1R12AO14974 1030 aaPredicted RBP13.9□□□□□ -0.18
VARS-228ENST00000495010 PMPCBO75439 489 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 PROSCO94903 275 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 MT-CYBP00156 380 aaPredicted RBP13.9□□□□□ -0.18
VARS-228ENST00000495010 SERPINC1P01008 464 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 CDH3P22223 829 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 HMGCLP35914 325 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 SPAM1P38567 509 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 TAS2R40P59535 323 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 TYRO3Q06418 890 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 ADCY2Q08462 1091 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 RAPSNQ13702 412 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 NFE2L1Q14494 772 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 GSE1Q14687 1217 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 SLC14A2Q15849 920 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 ANO6Q4KMQ2 910 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 ODF2Q5BJF6 829 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 PLEKHS1Q5SXH7 462 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 HGSNATQ68CP4 663 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 FAM151BQ6UXP7 276 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 ZNF517Q6ZMY9 492 aaPredicted RBP13.9□□□□□ -0.18
VARS-228ENST00000495010 RAB43Q86YS6 212 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 RBMXL3Q8N7X1 1067 aaKnown RBP13.9□□□□□ -0.18
VARS-228ENST00000495010 RASGEF1AQ8N9B8 481 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 SLC38A9Q8NBW4 561 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 SPATA22Q8NHS9 363 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 ZFPM2Q8WW38 1151 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 C12orf66Q96MD2 445 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 TLR10Q9BXR5 811 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 ERRFI1Q9UJM3 462 aaPredicted RBP13.9□□□□□ -0.18
VARS-228ENST00000495010 SLC5A6Q9Y289 635 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 SPO11Q9Y5K1 396 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 COLEC10Q9Y6Z7 277 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 SHANK1Q9Y566 2161 aa13.9□□□□□ -0.18
VARS-228ENST00000495010 A0A087X0T9 212 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 A0A0A6YYK5 440 aaPredicted RBP13.89□□□□□ -0.19
VARS-228ENST00000495010 A0A1B0GTH6 734 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 KRT86O43790 486 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 UGT1A9O60656 530 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 CLDN1O95832 211 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 FAM228BP0C875 321 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 UGT1A6P19224 532 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 MSH3P20585 1137 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 CYP2A7P20853 494 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 UGT1A1P22309 533 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 UGT1A4P22310 534 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 AKT1P31749 480 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 ARCN1P48444 511 aaKnown RBP13.89□□□□□ -0.19
VARS-228ENST00000495010 CTSCP53634 463 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 ITGA1P56199 1179 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 ITGA9Q13797 1035 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 LONRF2Q1L5Z9 754 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 FIGNQ5HY92 759 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 FAM182AQ5T1J6 154 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 METRNLQ641Q3 311 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 LCN10Q6JVE6 187 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 FAM83HQ6ZRV2 1179 aaPredicted RBP13.89□□□□□ -0.19
VARS-228ENST00000495010 CPNE8Q86YQ8 564 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 PLD5Q8N7P1 536 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 GLIS1Q8NBF1 620 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 RAPGEF5Q92565 580 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 SYN2Q92777 582 aaPredicted RBP13.89□□□□□ -0.19
VARS-228ENST00000495010 SNRNP40Q96DI7 357 aaKnown RBP13.89□□□□□ -0.19
VARS-228ENST00000495010 C19orf60Q96EN9 201 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 NAP1L5Q96NT1 182 aaPredicted RBP13.89□□□□□ -0.19
VARS-228ENST00000495010 INSM2Q96T92 566 aaPredicted RBP13.89□□□□□ -0.19
VARS-228ENST00000495010 SMAD5Q99717 465 aaKnown RBP13.89□□□□□ -0.19
VARS-228ENST00000495010 WWP1Q9H0M0 922 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 TRABDQ9H4I3 376 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 ACTR5Q9H9F9 607 aaPredicted RBP13.89□□□□□ -0.19
VARS-228ENST00000495010 UGT1A7Q9HAW7 530 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 UGT1A10Q9HAW8 530 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 UGT1A8Q9HAW9 530 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 GLOD4Q9HC38 313 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 SYTL2Q9HCH5 934 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 IL26Q9NPH9 171 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 UBP1Q9NZI7 540 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 C5AR2Q9P296 337 aa13.89□□□□□ -0.19
VARS-228ENST00000495010 UVRAGQ9P2Y5 699 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms