RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RSC1A1Q92681 617 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 CDKN2AIPNLQ96HQ2 116 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 DDA1Q9BW61 102 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 WWP1Q9H0M0 922 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 RAB6BQ9NRW1 208 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 IMP3Q9NV31 184 aaKnown RBP32.53■■■□□ 2.8
CBX4-203ENST00000494546 CFAP20Q9Y6A4 193 aaKnown RBP32.53■■■□□ 2.8
CBX4-203ENST00000494546 H7C0S8 307 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 PRSS56P0CW18 603 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 ATP1B2P14415 290 aaPredicted RBP32.52■■■□□ 2.8
CBX4-203ENST00000494546 ARSDP51689 593 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 CDH17Q12864 832 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 CCDC38Q502W7 563 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 DCAF12Q5T6F0 453 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 ANKS6Q68DC2 871 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 SERPINA9Q86WD7 417 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 JPH3Q8WXH2 748 aaPredicted RBP32.52■■■□□ 2.8
CBX4-203ENST00000494546 LINC00615Q96LM1 132 aaPredicted RBP32.52■■■□□ 2.8
CBX4-203ENST00000494546 C9orf72Q96LT7 481 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 TLR10Q9BXR5 811 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 ASPSCR1Q9BZE9 553 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 ZDHHC3Q9NYG2 299 aa32.52■■■□□ 2.8
CBX4-203ENST00000494546 KLHL33A6NCF5 533 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 EIF4E1BA6NMX2 242 aaKnown RBP32.51■■■□□ 2.79
CBX4-203ENST00000494546 STMND1H3BQB6 276 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 CAPN5O15484 640 aaPredicted RBP32.51■■■□□ 2.79
CBX4-203ENST00000494546 GAS8O95995 478 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 C9P02748 559 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 ACRV1P26436 265 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 CAPZBP47756 277 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 PRLHRP49683 370 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 RAB15P59190 212 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 CCNG2Q16589 344 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 MANEAQ5SRI9 462 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 VASH2Q86V25 355 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 DTX1Q86Y01 620 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 GLIS1Q8NBF1 620 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 CTRCQ99895 268 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 PAK5Q9P286 719 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 ACSL5Q9ULC5 683 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 LOC400499M0QZD8 3231 aa32.51■■■□□ 2.79
CBX4-203ENST00000494546 EFSO43281 561 aa32.5■■■□□ 2.79
CBX4-203ENST00000494546 FGGP02679 453 aa32.5■■■□□ 2.79
CBX4-203ENST00000494546 POLBP06746 335 aa32.5■■■□□ 2.79
CBX4-203ENST00000494546 MTHFD1P11586 935 aaKnown RBP32.5■■■□□ 2.79
CBX4-203ENST00000494546 LEPRP48357 1165 aaKnown RBP32.5■■■□□ 2.79
CBX4-203ENST00000494546 MC2RQ01718 297 aa32.5■■■□□ 2.79
CBX4-203ENST00000494546 CFAP206Q8IYR0 622 aa32.5■■■□□ 2.79
CBX4-203ENST00000494546 SNRNP27Q8WVK2 155 aaKnown RBP32.5■■■□□ 2.79
CBX4-203ENST00000494546 C12orf66Q96MD2 445 aa32.5■■■□□ 2.79
CBX4-203ENST00000494546 INSM2Q96T92 566 aaPredicted RBP32.5■■■□□ 2.79
CBX4-203ENST00000494546 IGSF10Q6WRI0 2623 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 TRBV5-4A0A0C4DH59 114 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 MROH6A6NGR9 719 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 IQCJ-SCHIP1C9J366 451 aaPredicted RBP32.49■■■□□ 2.79
CBX4-203ENST00000494546 CEP104O60308 925 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 RASSF9O75901 435 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 SLC35G4P0C7Q5 338 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 ZSCAN5DPP0CG00 497 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 GRIA1P42261 906 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 CACNG1Q06432 222 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 SEMA5AQ13591 1074 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 PLCL1Q15111 1095 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 SKIDA1Q1XH10 827 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 LILRA3Q8N6C8 439 aaPredicted RBP32.49■■■□□ 2.79
CBX4-203ENST00000494546 SPDYE1Q8NFV5 336 aaPredicted RBP32.49■■■□□ 2.79
CBX4-203ENST00000494546 MAIP1Q8WWC4 291 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 AHCTF1Q8WYP5 2266 aa32.49■■■□□ 2.79
CBX4-203ENST00000494546 ATXN7O15265 892 aaPredicted RBP32.48■■■□□ 2.79
CBX4-203ENST00000494546 SUN1O94901 812 aa32.48■■■□□ 2.79
CBX4-203ENST00000494546 ANKRD34CP0C6C1 535 aa32.48■■■□□ 2.79
CBX4-203ENST00000494546 CXCR5P32302 372 aa32.48■■■□□ 2.79
CBX4-203ENST00000494546 SEPHS1P49903 392 aa32.48■■■□□ 2.79
CBX4-203ENST00000494546 RHDQ02161 417 aa32.48■■■□□ 2.79
CBX4-203ENST00000494546 IRGCQ6NXR0 463 aa32.48■■■□□ 2.79
CBX4-203ENST00000494546 DUS1LQ6P1R4 473 aaKnown RBP32.48■■■□□ 2.79
CBX4-203ENST00000494546 XKR5Q6UX68 686 aa32.48■■■□□ 2.79
CBX4-203ENST00000494546 HM13Q8TCT9 377 aa32.48■■■□□ 2.79
CBX4-203ENST00000494546 IGLV3-16A0A075B6K0 115 aa32.47■■■□□ 2.79
CBX4-203ENST00000494546 APRTP07741 180 aa32.47■■■□□ 2.79
CBX4-203ENST00000494546 MSNP26038 577 aaKnown RBP32.47■■■□□ 2.79
CBX4-203ENST00000494546 RPL22P35268 128 aaKnown RBP32.47■■■□□ 2.79
CBX4-203ENST00000494546 GSE1Q14687 1217 aa32.47■■■□□ 2.79
CBX4-203ENST00000494546 KIAA1614Q5VZ46 1190 aa32.47■■■□□ 2.79
CBX4-203ENST00000494546 FAM92BQ6ZTR7 304 aa32.47■■■□□ 2.79
CBX4-203ENST00000494546 PIANPQ8IYJ0 282 aa32.47■■■□□ 2.79
CBX4-203ENST00000494546 ZDHHC12Q96GR4 267 aa32.47■■■□□ 2.79
CBX4-203ENST00000494546 TEFMQ96QE5 360 aaKnown RBP32.47■■■□□ 2.79
CBX4-203ENST00000494546 FBXO8Q9NRD0 319 aa32.47■■■□□ 2.79
CBX4-203ENST00000494546 OR51F1A6NGY5 319 aa32.46■■■□□ 2.79
CBX4-203ENST00000494546 ATP1A2P50993 1020 aa32.46■■■□□ 2.79
CBX4-203ENST00000494546 DBN1Q16643 649 aa32.46■■■□□ 2.79
CBX4-203ENST00000494546 TAF1BQ53T94 588 aaPredicted RBP32.46■■■□□ 2.79
CBX4-203ENST00000494546 DRICH1Q6PGQ1 229 aaPredicted RBP32.46■■■□□ 2.79
CBX4-203ENST00000494546 CEACAM20Q6UY09 585 aa32.46■■■□□ 2.79
CBX4-203ENST00000494546 GSTA5Q7RTV2 222 aa32.46■■■□□ 2.79
CBX4-203ENST00000494546 SLC39A7Q92504 469 aa32.46■■■□□ 2.79
CBX4-203ENST00000494546 RMDN2Q96LZ7 410 aa32.46■■■□□ 2.79
CBX4-203ENST00000494546 GRPEL1Q9HAV7 217 aa32.46■■■□□ 2.79
CBX4-203ENST00000494546 APMAPQ9HDC9 416 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms