RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 UNQ6494/PRO21346Q6UXR6 183 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 WASH2PQ6VEQ5 465 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 PPP1R21Q6ZMI0 780 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 TMPRSS9Q7Z410 1059 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 WDR48Q8TAF3 677 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 GDAP1Q8TB36 358 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 MAPK15Q8TD08 544 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 SLC37A2Q8TED4 501 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 NAT14Q8WUY8 206 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 PEX13Q92968 403 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 ULK4Q96C45 1275 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 SGSM3Q96HU1 749 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 ZCCHC2Q9C0B9 1178 aaKnown RBP8.62□□□□□ -1.03
ITGB1-217ENST00000494395 DDX47Q9H0S4 455 aaKnown RBP8.62□□□□□ -1.03
ITGB1-217ENST00000494395 WASH6PQ9NQA3 447 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 KLC4Q9NSK0 619 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 TREX1Q9NSU2 369 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 LRIT1Q9P2V4 623 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 CLCA2Q9UQC9 943 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 SAR1BQ9Y6B6 198 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 WDFY3Q8IZQ1 3526 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 ASPMQ8IZT6 3477 aa8.62□□□□□ -1.03
ITGB1-217ENST00000494395 FREM2Q5SZK8 3169 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 TPRP12270 2363 aaKnown RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 GOLGA6L10A0A0M3HER8 536 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 A0A1W2PNU3 283 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 CCDC78A2IDD5 438 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 CCDC162PA2VCL2 907 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 CTAGE9A4FU28 777 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 OR2AG2A6NM03 316 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 D6RAR5 112 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 B4GAT1O43505 415 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 RPLP1P05386 114 aaKnown RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 ACRV1P26436 265 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 IVDP26440 423 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 ARNTP27540 789 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 GPR3P46089 330 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 NPY2RP49146 381 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 LMAN1P49257 510 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 PRLHRP49683 370 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 VPS41P49754 854 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 ETF1P62495 437 aaKnown RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 UBE2IP63279 158 aaKnown RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 CRADDP78560 199 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 CACNG1Q06432 222 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 SQSTM1Q13501 440 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 LAMB3Q13751 1172 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 PTK6Q13882 451 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 RTP5Q14D33 572 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 DBN1Q16643 649 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 INSCQ1MX18 579 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 SKIDA1Q1XH10 827 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 ISXQ2M1V0 245 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 PCID2Q5JVF3 399 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 AGAP9Q5VTM2 703 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 TMEM220Q6QAJ8 160 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 ABRAXAS1Q6UWZ7 409 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 FAM83HQ6ZRV2 1179 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 CAND1Q86VP6 1230 aaKnown RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 TRAPPC5Q8IUR0 188 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 CCNJLQ8IV13 435 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 AGGF1Q8N302 714 aaeCLIP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 NAT8LQ8N9F0 302 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 MCUQ8NE86 351 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 GRK7Q8WTQ7 553 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 HDAC10Q969S8 669 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 MRRFQ96E11 262 aaKnown RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 LINC00615Q96LM1 132 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 DEPDC7Q96QD5 511 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 KIFC1Q9BW19 673 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 IL22Q9GZX6 179 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 LRRN3Q9H3W5 708 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 FAM96AQ9H5X1 160 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 MRM3Q9HC36 420 aaKnown RBP8.61□□□□□ -1.03
ITGB1-217ENST00000494395 PRDM8Q9NQV8 689 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 CHRAC1Q9NRG0 131 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 DKK4Q9UBT3 224 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 CRLS1Q9UJA2 301 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 PCDHB1Q9Y5F3 818 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 ENTPD2Q9Y5L3 495 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 SLC30A1Q9Y6M5 507 aa8.61□□□□□ -1.03
ITGB1-217ENST00000494395 ACACBO00763 2458 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 CEP295Q9C0D2 2601 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 CHD8Q9HCK8 2581 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 IGHV1OR21-1A0A087WYE8 117 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 KIR2DS5A0A0G2JLQ3 304 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 A0A0G2JNG1 304 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 SLC35F4A4IF30 521 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 TRABD2BA6NFA1 517 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 OR5K4A6NMS3 321 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 KIR2DS3K7RE56 304 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 AP3B1O00203 1094 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 KCNJ13O60928 360 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 CSO75390 466 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 POP7O75817 140 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 GAS8O95995 478 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 GOT2P00505 430 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 RPLP0P05388 317 aaKnown RBP8.6□□□□□ -1.03
ITGB1-217ENST00000494395 PROS1P07225 676 aa8.6□□□□□ -1.03
ITGB1-217ENST00000494395 MLNP12872 115 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms