RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 A6NCN8 305 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 PRR19A6NJB7 356 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 NUDT21O43809 227 aaKnown RBP12.24□□□□□ -0.45
TRA2A-209ENST00000494255 EML2O95834 649 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 RPL10P27635 214 aaKnown RBP12.24□□□□□ -0.45
TRA2A-209ENST00000494255 DEKP35659 375 aaKnown RBP12.24□□□□□ -0.45
TRA2A-209ENST00000494255 EIF3BP55884 814 aaKnown RBP12.24□□□□□ -0.45
TRA2A-209ENST00000494255 PERM1Q5SV97 790 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 METRNLQ641Q3 311 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 DHRS13Q6UX07 377 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 UNC5AQ6ZN44 842 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 FAM83HQ6ZRV2 1179 aaPredicted RBP12.24□□□□□ -0.45
TRA2A-209ENST00000494255 CCDC25Q86WR0 208 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 C17orf82Q86X59 251 aaPredicted RBP12.24□□□□□ -0.45
TRA2A-209ENST00000494255 CILP2Q8IUL8 1156 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 CFAP206Q8IYR0 622 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 SLC37A2Q8TED4 501 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 PYROXD1Q8WU10 500 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 ADAMTS14Q8WXS8 1223 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 SEC14L1Q92503 715 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 CCDC3Q9BQI4 270 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 FAM129AQ9BZQ8 928 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 PHACTR1Q9C0D0 580 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 PPANQ9NQ55 473 aaKnown RBP12.24□□□□□ -0.45
TRA2A-209ENST00000494255 INTS10Q9NVR2 710 aaKnown RBP12.24□□□□□ -0.45
TRA2A-209ENST00000494255 RNF215Q9Y6U7 377 aa12.24□□□□□ -0.45
TRA2A-209ENST00000494255 H3BMM5 538 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 LIN7AO14910 233 aaPredicted RBP12.23□□□□□ -0.45
TRA2A-209ENST00000494255 DKK1O94907 266 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 SLC35G4P0C7Q5 338 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 PNLIPP16233 465 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 RPS3P23396 243 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRA2A-209ENST00000494255 HHEXQ03014 270 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 FOXC1Q12948 553 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 CBLBQ13191 982 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 FASTKD3Q14CZ7 662 aaKnown RBP12.23□□□□□ -0.45
TRA2A-209ENST00000494255 TRADDQ15628 312 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 SYTL3Q4VX76 610 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 HSP90AA5PQ58FG0 334 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 STEAP4Q687X5 459 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 ABRAXAS1Q6UWZ7 409 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 ZDHHC24Q6UX98 284 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 ELMO1Q92556 727 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 SH3KBP1Q96B97 665 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 CXorf40BQ96DE9 158 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 CERS2Q96G23 380 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 PANX3Q96QZ0 392 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 SYNDIG1Q9H7V2 258 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 L2HGDHQ9H9P8 463 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 SARS2Q9NP81 518 aaKnown RBP12.23□□□□□ -0.45
TRA2A-209ENST00000494255 IARS2Q9NSE4 1012 aaKnown RBP12.23□□□□□ -0.45
TRA2A-209ENST00000494255 MTRF1LQ9UGC7 380 aaKnown RBP12.23□□□□□ -0.45
TRA2A-209ENST00000494255 DMGDHQ9UI17 866 aaKnown RBP12.23□□□□□ -0.45
TRA2A-209ENST00000494255 PSMD13Q9UNM6 376 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 PCDHB1Q9Y5F3 818 aa12.23□□□□□ -0.45
TRA2A-209ENST00000494255 CNOT1A5YKK6 2376 aaKnown RBP12.23□□□□□ -0.45
TRA2A-209ENST00000494255 OPA1O60313 960 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 S1PR4O95977 384 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 VIPP01282 170 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 ERVK-10P10266 1014 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 SLC1A2P43004 574 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 FASLGP48023 281 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 PLOD1Q02809 727 aaPredicted RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 RPA4Q13156 261 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 TMED2Q15363 201 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 CEP128Q6ZU80 1094 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 PALM2Q8IXS6 379 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 UNC5BQ8IZJ1 945 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 Q8N9G6 341 aaPredicted RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 WDR48Q8TAF3 677 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 GSDMBQ8TAX9 411 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 LPGAT1Q92604 370 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 WDR83Q9BRX9 315 aaKnown RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 WWP1Q9H0M0 922 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 P2RY12Q9H244 342 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 CCDC68Q9H2F9 335 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 COG4Q9H9E3 785 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 SCHIP1Q9P0W5 487 aaPredicted RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 CPNE7Q9UBL6 633 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 FBXO5Q9UKT4 447 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 CRYL1Q9Y2S2 319 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 ESR1P03372 595 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 ADRB1P08588 477 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 BRAFP15056 766 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 ITGB6P18564 788 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 XRCC1P18887 633 aaPredicted RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 ALDH4A1P30038 563 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 FMO4P31512 558 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 GPR3P46089 330 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 CARSP49589 748 aaKnown RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 PPM1FP49593 454 aaPredicted RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 ADARP55265 1226 aaKnown RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 CTBP1Q13363 440 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 BOP1Q14137 746 aaKnown RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 FRG1Q14331 258 aaKnown RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 CLCA4Q14CN2 919 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 BRD3Q15059 726 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 ZNF438Q7Z4V0 828 aa12.22□□□□□ -0.45
TRA2A-209ENST00000494255 RAB44Q7Z6P3 723 aaPredicted RBP12.22□□□□□ -0.45
TRA2A-209ENST00000494255 DENND6AQ8IWF6 608 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms