RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FAXCQ5TGI0 409 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PLET1Q6UQ28 207 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 GK5Q6ZS86 529 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 MIB1Q86YT6 1006 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 RIOX2Q8IUF8 465 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 C10orf107Q8IVU9 208 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF680Q8NEM1 530 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 UTP15Q8TED0 518 aaKnown RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF431Q8TF32 576 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 DEPDC1BQ8WUY9 529 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 HEXDCQ8WVB3 486 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 GPRASP2Q96D09 838 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 RNF170Q96K19 258 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF778Q96MU6 729 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 NPAS1Q99742 590 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 SSX3Q99909 188 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 WDR77Q9BQA1 342 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TINF2Q9BSI4 451 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PDCD10Q9BUL8 212 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TRIM8Q9BZR9 551 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CAB39LQ9H9S4 337 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 MRPL47Q9HD33 250 aaKnown RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 BIN3Q9NQY0 253 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 EXD2Q9NVH0 621 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TRPM5Q9NZQ8 1165 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 NYAP2Q9P242 653 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF219Q9P2Y4 722 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 F5H6K3 240 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 INPPL1O15357 1258 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 KDM4BO94953 1096 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 DNTTP04053 509 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 FAM86B2P0C5J1 330 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 TCF4P15884 667 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 CD36P16671 472 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 PTAFRP25105 342 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 PTX3P26022 381 aaPredicted RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 KLRC2P26717 231 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 MAP2K4P45985 399 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 CSTF1Q05048 431 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 MAB21L1Q13394 359 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 TEAD4Q15561 434 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 GRK1Q15835 563 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SYT16Q17RD7 645 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 EML3Q32P44 896 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ASPRV1Q53RT3 343 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 PMF1Q6P1K2 205 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 LETMD1Q6P1Q0 360 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 PKN3Q6P5Z2 889 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 DPPA2Q7Z7J5 298 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ZDHHC17Q8IUH5 632 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF444Q8N0Y2 327 aaPredicted RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 TTLL6Q8N841 843 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 OR7G3Q8NG95 312 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 OR6C4Q8NGE1 309 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 FAM110BQ8TC76 370 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 DYNC2LI1Q8TCX1 351 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 MZB1Q8WU39 189 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 POF1BQ8WVV4 589 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 NR4A3Q92570 626 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 HDAC10Q969S8 669 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 MTERF3Q96E29 417 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 EXOC2Q96KP1 924 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 LURAP1Q96LR2 239 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 TMEM68Q96MH6 324 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 LINC00052Q96N35 136 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 NT5C1BQ96P26 610 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 KCTD10Q9H3F6 313 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ASB7Q9H672 318 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SIX2Q9NPC8 291 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ACSS2Q9NR19 701 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 GSN-AS1Q9NRJ2 163 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 APEX2Q9UBZ4 518 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SCN4AP35499 1836 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 A0A1B0GV90 55 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 HACD1B0YJ81 288 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ZBTB24O43167 697 aaPredicted RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SOAT2O75908 522 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 GABARAPO95166 117 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 RPS17P08708 135 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ERVK-10P10266 1014 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 DARSP14868 501 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 RAB3BP20337 219 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 CCR10P46092 362 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 HNMTP50135 292 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SLC7A2P52569 658 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 HK3P52790 923 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 IL5RAQ01344 420 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SLC10A2Q12908 348 aaPredicted RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ORC1Q13415 861 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 INTS11Q5TA45 600 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 PIK3R6Q5UE93 754 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 LUZP2Q86TE4 346 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 RHOT1Q8IXI2 618 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF781Q8N8C0 355 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 KCT2Q8NC54 265 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 DDX1Q92499 740 aaKnown RBP6.77□□□□□ -1.33
VPS13B-205ENST00000493587 CD101Q93033 1021 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SLC35C1Q96A29 364 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 FKBP10Q96AY3 582 aa6.77□□□□□ -1.33
VPS13B-205ENST00000493587 SERPINB11Q96P15 392 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms