RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 DCBLD1Q8N8Z6 715 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 BBOF1Q8ND07 529 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 KIF18AQ8NI77 898 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 SH3KBP1Q96B97 665 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 CXorf40BQ96DE9 158 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 SIGLEC10Q96LC7 697 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 KCNK4Q9NYG8 393 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 SCHIP1Q9P0W5 487 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-209ENST00000493166 ACSL5Q9ULC5 683 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 PSMD13Q9UNM6 376 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 WDR37Q9Y2I8 494 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 SNX24Q9Y343 169 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 PRSS21Q9Y6M0 314 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 C17orf113A0A1B0GUU1 675 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 A0A1W2PQM1 296 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 D6RAR5 112 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 PFDN6O15212 129 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 NDUFS3O75489 264 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 BANF1O75531 89 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 POLBP06746 335 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 GSTM1P09488 218 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 SLC35G4P0C7Q5 338 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 PGAM1P18669 254 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 XRCC1P18887 633 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 ARCN1P48444 511 aaKnown RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 ARL4CP56559 192 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 UBE2IP63279 158 aaKnown RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 GSTM4Q03013 218 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 CALCOCO2Q13137 446 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 TUBB2AQ13885 445 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 CLCA4Q14CN2 919 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 HIF1AQ16665 826 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 AMZ1Q400G9 498 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 MAP9Q49MG5 647 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 RNF187Q5TA31 235 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 ZNF449Q6P9G9 518 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 SDCCAG8Q86SQ7 713 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 ZNF761Q86XN6 746 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 CACTIN-AS1Q8N1I8 211 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 AHCYL2Q96HN2 611 aaKnown RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 FCRL3Q96P31 734 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 ERP44Q9BS26 406 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 TUBB2BQ9BVA1 445 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 TSSK1BQ9BXA7 367 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 ZMYND15Q9H091 742 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 WWP1Q9H0M0 922 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 RAB17Q9H0T7 212 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 DPH5Q9H2P9 285 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 COG4Q9H9E3 785 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 POT1Q9NUX5 634 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 IL1RAPL1Q9NZN1 696 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 ZNF624Q9P2J8 865 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 ATXN7L1Q9ULK2 861 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
CLIP2-209ENST00000493166 MRFAP1Q9Y605 127 aa12.53□□□□□ -0.4
CLIP2-209ENST00000493166 IGHV1OR21-1A0A087WYE8 117 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 ZCWPW2A0A1B0GU75 182 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 UBA6A0AVT1 1052 aaPredicted RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 PRMT5O14744 637 aaPredicted RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 B4GAT1O43505 415 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 TTC4O95801 387 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 OGNP20774 298 aaKnown RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 SLC19A1P41440 591 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 GPLD1P80108 840 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 LONRF1Q17RB8 773 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 MSS51Q4VC12 460 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 SYTL3Q4VX76 610 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 PTRHD1Q6GMV3 140 aaKnown RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 NEPROQ6NW34 567 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 C8orf74Q6P047 294 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 LILRA3Q8N6C8 439 aaPredicted RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 GPR150Q8NGU9 434 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 OR10G6Q8NH81 332 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 ELMO1Q92556 727 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 C12orf66Q96MD2 445 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 PWWP2AQ96N64 755 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 EBNA1BP2Q99848 306 aaKnown RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 NAT9Q9BTE0 207 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 C20orf96Q9NUD7 363 aaPredicted RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 IMP3Q9NV31 184 aaKnown RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 WHRNQ9P202 907 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 GNPTGQ9UJJ9 305 aa12.52□□□□□ -0.41
CLIP2-209ENST00000493166 CFAP20Q9Y6A4 193 aaKnown RBP12.52□□□□□ -0.41
CLIP2-209ENST00000493166 LIN7AO14910 233 aaPredicted RBP12.51□□□□□ -0.41
CLIP2-209ENST00000493166 DUX1O43812 170 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 CPNE6O95741 557 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 MTHFD1P11586 935 aaKnown RBP12.51□□□□□ -0.41
CLIP2-209ENST00000493166 ITGB6P18564 788 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 CD1CP29017 333 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 ELK3P41970 407 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 MAPK9P45984 424 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 PREPP48147 710 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 EPHA4P54764 986 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 EIF3BP55884 814 aaKnown RBP12.51□□□□□ -0.41
CLIP2-209ENST00000493166 RPA4Q13156 261 aa12.51□□□□□ -0.41
CLIP2-209ENST00000493166 BOP1Q14137 746 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms