RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	C1orf189	Q5VU69	101 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	OTUD1	Q5VV17	481 aa	Predicted RBP	5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	ZNF385C	Q66K41	422 aa	Predicted RBP	5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	RWDD4	Q6NW29	188 aa	Known RBP	5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	DENND1B	Q6P3S1	775 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	FBXO38	Q6PIJ6	1188 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	ARSK	Q6UWY0	536 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	ADAMTSL4	Q6UY14	1074 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	C11orf96	Q7Z7L8	435 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	CREBRF	Q8IUR6	639 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	MYRIP	Q8NFW9	859 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	OR1L3	Q8NH93	324 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	SUN3	Q8TAQ9	357 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	STK32A	Q8WU08	396 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	HAS2	Q92819	552 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	SMARCE1	Q969G3	411 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	HDAC10	Q969S8	669 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	AP2M1	Q96CW1	435 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	ECHDC3	Q96DC8	303 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	TUBGCP5	Q96RT8	1024 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	GDPD2	Q9HCC8	539 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	SLC40A1	Q9NP59	571 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	DMRT3	Q9NQL9	472 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	KLC4	Q9NSK0	619 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	TMEM51	Q9NW97	253 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	BEX4	Q9NWD9	120 aa	Predicted RBP	5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	PTGFRN	Q9P2B2	879 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	IFT80	Q9P2H3	777 aa	Predicted RBP	5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	ARMCX3	Q9UH62	379 aa	Predicted RBP	5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	CDC23	Q9UJX2	597 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	NPIPA1	Q9UND3	350 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	HPSE	Q9Y251	543 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	ZAN	Q9Y493	2812 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	SEC16A	O15027	2179 aa		5.22	□□□□□ -1.57
SEC13-219	ENST00000492602	SPTB	P11277	2137 aa		5.21	□□□□□ -1.57
SEC13-219	ENST00000492602	TTC24	A2A3L6	582 aa	Predicted RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	OR52A4P	A6NMU1	304 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602		A6NNC1	897 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602		E7EQ34	232 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	SLC16A3	O15427	465 aa	Known RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	CNOT3	O75175	753 aa	Known RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	HEXIM1	O94992	359 aa	Known RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	HBQ1	P09105	142 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	PVR	P15151	417 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	CD53	P19397	219 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	TFE3	P19532	575 aa	Predicted RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	TNFAIP3	P21580	790 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	MMP11	P24347	488 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	VIPR1	P32241	457 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	KIR2DL3	P43628	341 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	DLX5	P56178	289 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	HSF1	Q00613	529 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	ALDH6A1	Q02252	535 aa	Known RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	LRRC63	Q05C16	580 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	DPT	Q07507	201 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	OLIG2	Q13516	323 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	TPD52L1	Q16890	204 aa	Predicted RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	TUBB8	Q3ZCM7	444 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	CCDC40	Q4G0X9	1142 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	ZNF789	Q5FWF6	425 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	C10orf62	Q5T681	223 aa	Predicted RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	AGAP9	Q5VTM2	703 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	TMEM211	Q6ICI0	200 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	KLHL35	Q6PF15	583 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	TRIM72	Q6ZMU5	477 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	KRBA2	Q6ZNG9	492 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	CAPN12	Q6ZSI9	719 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	RFLNA	Q6ZTI6	216 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	USP45	Q70EL2	814 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	CCDC71	Q8IV32	467 aa	Predicted RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	RBM12B	Q8IXT5	1001 aa	Known RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	MARVELD2	Q8N4S9	558 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	C3orf20	Q8ND61	904 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	RND1	Q92730	232 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	SCAMP4	Q969E2	229 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	CXorf40B	Q96DE9	158 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	COX14	Q96I36	57 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	CD180	Q99467	661 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	AGAP2	Q99490	1192 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	KLC2	Q9H0B6	622 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	RETREG1	Q9H6L5	497 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	ASNSD1	Q9NWL6	643 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	CRIM1	Q9NZV1	1036 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	SERTAD3	Q9UJW9	196 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	CDYL	Q9Y232	598 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	MRPS2	Q9Y399	296 aa	Known RBP	5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	DOCK4	Q8N1I0	1966 aa		5.21	□□□□□ -1.58
SEC13-219	ENST00000492602	SERINC4	A6NH21	518 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	PSMD11	O00231	422 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	ASNA1	O43681	348 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	DAB1	O75553	588 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	MTA2	O94776	668 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	PRAMEF1	O95521	474 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	WDPCP	O95876	746 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	TPM2	P07951	284 aa		5.2	□□□□□ -1.58
SEC13-219	ENST00000492602	MYBL2	P10244	700 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms