RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MYLK3Q32MK0 819 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 GTF2H2CQ6P1K8 395 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 FAM47BQ8NA70 645 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 HJURPQ8NCD3 748 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 MYRFLQ96LU7 910 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 ASB2Q96Q27 587 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 KCTD14Q9BQ13 255 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 Q9H521 79 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 RPF2Q9H7B2 306 aaKnown RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 SPATS2LQ9NUQ6 558 aaKnown RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 HCFC1R1Q9NWW0 138 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 DUS2Q9NX74 493 aaKnown RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 PCDHA9Q9Y5H5 950 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 MAGED1Q9Y5V3 778 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 VCANP13611 3396 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 A0A1W2PP18 115 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 STX16O14662 325 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 HTRA2O43464 458 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 FKTNO75072 461 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 ESR1P03372 595 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 PRR35P0CG20 571 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 SLC5A9Q2M3M2 681 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 RNF175Q8N4F7 328 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 KRTCAP2Q8N6L1 136 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 GPR26Q8NDV2 337 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 SLC22A17Q8WUG5 538 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 PYCR2Q96C36 320 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 FBXL20Q96IG2 436 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 LIN28AQ9H9Z2 209 aaKnown RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 COMMD8Q9NX08 183 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 KLQ9UEF7 1012 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 HEMK1Q9Y5R4 338 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 CEP290O15078 2479 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 TYW5A2RUC4 315 aaKnown RBP12.25□□□□□ -0.45
HMGN1-220ENST00000492280 UPK3BL1B0FP48 263 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 UPK3BL2E5RIL1 263 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 KLK8O60259 260 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF821O75541 412 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-220ENST00000492280 STAMBPO95630 424 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 TRBC1P01850 177 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-220ENST00000492280 TRAF3Q13114 568 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 AP5B1Q2VPB7 878 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 GTDC1Q4AE62 458 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.25□□□□□ -0.45
HMGN1-220ENST00000492280 NANOGP8Q6NSW7 305 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 MILR1Q7Z6M3 343 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 ADGRG5Q8IZF4 528 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 CATSPER1Q8NEC5 780 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 MTG2Q9H4K7 406 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 NANOGQ9H9S0 305 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 ABCB8Q9NUT2 735 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 DDX18Q9NVP1 670 aaKnown RBP12.25□□□□□ -0.45
HMGN1-220ENST00000492280 SMOXQ9NWM0 555 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 WWOXQ9NZC7 414 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 HACD3Q9P035 362 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 UTS2RQ9UKP6 389 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 DHRS7Q9Y394 339 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 BBIP1A8MTZ0 92 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 EI24O14681 340 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 MATN4O95460 622 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 PABPC4LP0CB38 370 aaKnown RBP12.25□□□□□ -0.45
HMGN1-220ENST00000492280 HSPA8P11142 646 aaKnown RBP12.25□□□□□ -0.45
HMGN1-220ENST00000492280 EPHB3P54753 998 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 ERVK-8P63133 956 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 TRAP1Q12931 704 aaKnown RBP12.25□□□□□ -0.45
HMGN1-220ENST00000492280 ARHGEF7Q14155 803 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 KRT80Q6KB66 452 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 ERMP1Q7Z2K6 904 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 SLC39A11Q8N1S5 342 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 GALNT15Q8N3T1 639 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 OR10Q1Q8NGQ4 319 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 PRUNE2Q8WUY3 3088 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 FOXJ1Q92949 421 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF597Q96LX8 424 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF558Q96NG5 402 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 SLC2A11Q9BYW1 496 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 FAM192AQ9GZU8 254 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 ZDHHC6Q9H6R6 413 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 SUN2Q9UH99 717 aa12.25□□□□□ -0.45
HMGN1-220ENST00000492280 GLYATL1P3A0A0U1RQE8 302 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 RNF103-CHMP3A0A140T963 221 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 DLGAP1O14490 977 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 TNFAIP8O95379 198 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 MLYCDO95822 493 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 C1QCP02747 245 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 UGT2B4P06133 528 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 SLC2A4P14672 509 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 HRH2P25021 359 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 HMOX2P30519 316 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF648Q5T619 568 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 LRRC66Q68CR7 880 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 TMEM214Q6NUQ4 689 aaKnown RBP12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CYP20A1Q6UW02 462 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 HACD2Q6Y1H2 254 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 MINDY1Q8N5J2 469 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 FAM86B1Q8N7N1 296 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF366Q8N895 744 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 DCAF4L2Q8NA75 395 aa12.24□□□□□ -0.45
HMGN1-220ENST00000492280 CYGBQ8WWM9 190 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms