RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 UBA6A0AVT1 1052 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 DDX3YO15523 660 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 SEPHS1P49903 392 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 ACY1Q03154 408 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 ABHD18Q0P651 414 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 KLF1Q13351 362 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 LY6DQ14210 128 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 SKIDA1Q1XH10 827 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 ZRANB3Q5FWF4 1079 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 TMTC4Q5T4D3 741 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 METRNLQ641Q3 311 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 TAS2R42Q7RTR8 314 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 OOSP2Q86WS3 158 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 KMT5CQ86Y97 462 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 RTP4Q96DX8 246 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 C12orf66Q96MD2 445 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 ULBP3Q9BZM4 244 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 ZNF768Q9H5H4 540 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 FKBPLQ9UIM3 349 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 GUCA1BQ9UMX6 200 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 PSMD13Q9UNM6 376 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 CAPN6Q9Y6Q1 641 aa16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 ZFC3H1O60293 1989 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-217ENST00000491330 B8ZZF3 427 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 KDM1AO60341 852 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 STK17BO94768 372 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 FTCDO95954 541 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 ATP1B2P14415 290 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 ADRA1AP35348 466 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 TMPRSS15P98073 1019 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 SEPT6Q14141 434 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 MAP7Q14244 749 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 RPE65Q16518 533 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 BCL7AQ4VC05 210 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 KHDC1Q4VXA5 237 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 BORAQ6PGQ7 559 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 PRSS42Q7Z5A4 293 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 C11orf96Q7Z7L8 435 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 PPP1R3BQ86XI6 285 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 CFAP206Q8IYR0 622 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 ZNF843Q8N446 348 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 BMPERQ8N8U9 685 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 SIDT2Q8NBJ9 832 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 STYXQ8WUJ0 223 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 MAIP1Q8WWC4 291 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 ANP32BQ92688 251 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 STAMBPL1Q96FJ0 436 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 OR6C1Q96RD1 312 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 FAM118BQ9BPY3 351 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 GRPEL1Q9HAV7 217 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 KCND3Q9UK17 655 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 PILRAQ9UKJ1 303 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 TMPRSS11EQ9UL52 423 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 ZNF148Q9UQR1 794 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 ZFHX4Q86UP3 3567 aa16.22■□□□□ 0.19
PDLIM2-217ENST00000491330 SPEGQ15772 3267 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 PTPRQQ9UMZ3 2332 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 C17orf113A0A1B0GUU1 675 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 MATN2O00339 956 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 MTHFD1P11586 935 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 BRAFP15056 766 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 MC4RP32245 332 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 FDFT1P37268 417 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 CCR10P46092 362 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 CTSCP53634 463 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 NFE2L1Q14494 772 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 CLCA4Q14CN2 919 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 DNTTIP2Q5QJE6 756 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 LYPLAL1Q5VWZ2 237 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 C6orf15Q6UXA7 325 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 PPP1R21Q6ZMI0 780 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 FAM92BQ6ZTR7 304 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 HOOK3Q86VS8 718 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 CARFQ8N187 725 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 NXPE1Q8N323 547 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 CCDC89Q8N998 374 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 HM13Q8TCT9 377 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 EXTL1Q92935 676 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 LINC00615Q96LM1 132 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 FCRL4Q96PJ5 515 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 TMEM121Q9BTD3 319 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 WWP1Q9H0M0 922 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 ZDHHC3Q9NYG2 299 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 FAM8A1Q9UBU6 413 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 RARRES3Q9UL19 164 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 ZKSCAN5Q9Y2L8 839 aa16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 TMEM184BQ9Y519 407 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-217ENST00000491330 SCN8AQ9UQD0 1980 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 AP3B1O00203 1094 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 POLBP06746 335 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 GFERP55789 205 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 PLOD1Q02809 727 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 CDH17Q12864 832 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 SPARCL1Q14515 664 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 RPS6KA1Q15418 735 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 C4orf22Q6V702 233 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 NLRP9Q7RTR0 991 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 KLHDC8BQ8IXV7 354 aa16.2■□□□□ 0.18
PDLIM2-217ENST00000491330 OR13C4Q8NGS5 318 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms