RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PADI1Q9ULC6 663 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 MRPS18BQ9Y676 258 aaKnown RBP19.31■□□□□ 0.68
SREBF1-216ENST00000490796 NBASA2RRP1 2371 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 UBA6A0AVT1 1052 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-216ENST00000490796 GPR39O43194 453 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 IPO7O95373 1038 aaKnown RBP19.3■□□□□ 0.68
SREBF1-216ENST00000490796 PRAMEF1O95521 474 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 AGTP01019 485 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 FGF5P12034 268 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 LPOP22079 712 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-216ENST00000490796 RBL1P28749 1068 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 MARCKSL1P49006 195 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 TUBB3Q13509 450 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 ERV3-1Q14264 604 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 KRT33BQ14525 404 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 GSE1Q14687 1217 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 SKIDA1Q1XH10 827 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.3■□□□□ 0.68
SREBF1-216ENST00000490796 DNTTIP2Q5QJE6 756 aaKnown RBP19.3■□□□□ 0.68
SREBF1-216ENST00000490796 ATP1A1-AS1Q5TC04 95 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 GPR150Q8NGU9 434 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 DCUN1D1Q96GG9 259 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 GBA3Q9H227 469 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 ASB8Q9H765 288 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 SMOXQ9NWM0 555 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 FAM8A1Q9UBU6 413 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 ACSL5Q9ULC5 683 aa19.3■□□□□ 0.68
SREBF1-216ENST00000490796 AAR2Q9Y312 384 aaKnown RBP19.3■□□□□ 0.68
SREBF1-216ENST00000490796 KLHL33A6NCF5 533 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 SLC35G4P0C7Q5 338 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 RALBP11234 206 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 MTHFD1P11586 935 aaKnown RBP19.29■□□□□ 0.68
SREBF1-216ENST00000490796 COPS2P61201 443 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 PDE1BQ01064 536 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 ACY1Q03154 408 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 TAF1AQ15573 450 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-216ENST00000490796 FAM83HQ6ZRV2 1179 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-216ENST00000490796 OOSP2Q86WS3 158 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 CDKL3Q8IVW4 592 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-216ENST00000490796 TC2NQ8N9U0 490 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 OR4K2Q8NGD2 314 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 ABHD17AQ96GS6 310 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 C12orf66Q96MD2 445 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 CD180Q99467 661 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 POLHQ9Y253 713 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 ARL5AQ9Y689 179 aa19.29■□□□□ 0.68
SREBF1-216ENST00000490796 CFAP20Q9Y6A4 193 aaKnown RBP19.29■□□□□ 0.68
SREBF1-216ENST00000490796 IGHV5-51A0A0C4DH38 117 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 PIPSLA2A3N6 862 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 C5orf60A6NFR6 353 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 MGAT4DA6NG13 374 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 CRTAMO95727 393 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 PYGMP11217 842 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 F8A1P23610 371 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 PTPRCAPQ14761 206 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 LACTB2Q53H82 288 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-216ENST00000490796 METRNLQ641Q3 311 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 DARS2Q6PI48 645 aaKnown RBP19.28■□□□□ 0.68
SREBF1-216ENST00000490796 BPHLQ86WA6 291 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-216ENST00000490796 KMT5CQ86Y97 462 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 KRT35Q92764 455 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 APOL2Q9BQE5 337 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 TWSG1Q9GZX9 223 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 WWP1Q9H0M0 922 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 C10orf88Q9H8K7 445 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 HRASLS2Q9NWW9 162 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 CRLS1Q9UJA2 301 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 TFR2Q9UP52 801 aa19.28■□□□□ 0.68
SREBF1-216ENST00000490796 CDC14CA4D256 554 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 TLCD2A6NGC4 264 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 MKRN2OSH3BPM6 223 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 SRP72O76094 671 aaKnown RBP19.27■□□□□ 0.68
SREBF1-216ENST00000490796 LCA5LO95447 670 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 PTMAP06454 111 aaKnown RBP19.27■□□□□ 0.68
SREBF1-216ENST00000490796 CASRP41180 1078 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 EIF3EP60228 445 aaKnown RBP19.27■□□□□ 0.68
SREBF1-216ENST00000490796 PPP1CAP62136 330 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 OTUD4Q01804 1114 aaKnown RBP19.27■□□□□ 0.68
SREBF1-216ENST00000490796 DNASE1L3Q13609 305 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 KCNAB1Q14722 419 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 TMTC4Q5T4D3 741 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 ACTL9Q8TC94 416 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 ZFPM2Q8WW38 1151 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 ULK4Q96C45 1275 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 SLC41A2Q96JW4 573 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 CALR3Q96L12 384 aaKnown RBP19.27■□□□□ 0.68
SREBF1-216ENST00000490796 FCRL4Q96PJ5 515 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 PPP1R2P1Q96PQ5 205 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 INSM2Q96T92 566 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-216ENST00000490796 MAP3K3Q99759 626 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 EPN3Q9H201 632 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 LHX9Q9NQ69 397 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 FKBPLQ9UIM3 349 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 COLEC10Q9Y6Z7 277 aa19.27■□□□□ 0.68
SREBF1-216ENST00000490796 BSNQ9UPA5 3926 aa19.27■□□□□ 0.67
SREBF1-216ENST00000490796 OR5K3A6NET4 321 aa19.26■□□□□ 0.67
SREBF1-216ENST00000490796 GOLGA6L3A6NEY3 463 aa19.26■□□□□ 0.67
SREBF1-216ENST00000490796 C21orf140B9A014 251 aa19.26■□□□□ 0.67
SREBF1-216ENST00000490796 CFAP99D6REC4 459 aa19.26■□□□□ 0.67
SREBF1-216ENST00000490796 GAPDHSO14556 408 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms