RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 BEND7Q8N7W2 519 aaPredicted RBP13.02□□□□□ -0.33
SNX12-205ENST00000490561 SIDT2Q8NBJ9 832 aaKnown RBP13.02□□□□□ -0.33
SNX12-205ENST00000490561 CD200R1Q8TD46 325 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 OR1E3Q8WZA6 343 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 GLMNQ92990 594 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 TLCD1Q96CP7 247 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 CCDC97Q96F63 343 aaPredicted RBP13.02□□□□□ -0.33
SNX12-205ENST00000490561 PDLIM5Q96HC4 596 aaKnown RBP13.02□□□□□ -0.33
SNX12-205ENST00000490561 SLC13A1Q9BZW2 595 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 ERVMER34-1Q9H9K5 563 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 CAB39LQ9H9S4 337 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 CYP4F12Q9HCS2 524 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 MKS1Q9NXB0 559 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 ACSL5Q9ULC5 683 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 MED16Q9Y2X0 877 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 GPSM3Q9Y4H4 160 aa13.02□□□□□ -0.33
SNX12-205ENST00000490561 IQCF5A8MTL0 148 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 PHGDHO43175 533 aaKnown RBP13.01□□□□□ -0.33
SNX12-205ENST00000490561 DFNA5O60443 496 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 GLRA3O75311 464 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 EPN2O95208 641 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 WISP3O95389 354 aaPredicted RBP13.01□□□□□ -0.33
SNX12-205ENST00000490561 CSF2P04141 144 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 WNT1P04628 370 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 SLC35E2BP0CK96 405 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 PYGBP11216 843 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 ZNF37AP17032 561 aaPredicted RBP13.01□□□□□ -0.33
SNX12-205ENST00000490561 ITGB6P18564 788 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 KRT4P19013 534 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 HK3P52790 923 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 ATP6V0D1P61421 351 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 TIAL1Q01085 375 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNX12-205ENST00000490561 SLC18A2Q05940 514 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 ILF3Q12906 894 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNX12-205ENST00000490561 ALG11Q2TAA5 492 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 AGAP9Q5VTM2 703 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 IL27RAQ6UWB1 636 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 CMC1Q7Z7K0 106 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 C11orf96Q7Z7L8 435 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 HID1Q8IV36 788 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 ZNF547Q8IVP9 402 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 CEP97Q8IW35 865 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 SRRM1Q8IYB3 904 aaKnown RBP13.01□□□□□ -0.33
SNX12-205ENST00000490561 PHACTR4Q8IZ21 702 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 SDR16C5Q8N3Y7 309 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 FSTL5Q8N475 847 aaPredicted RBP13.01□□□□□ -0.33
SNX12-205ENST00000490561 ACVR1CQ8NER5 493 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 LKAAEAR1Q8TD35 194 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 PIGKQ92643 395 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 PDXPQ96GD0 296 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 GSDMCQ9BYG8 508 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 ZDHHC5Q9C0B5 715 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 DERL2Q9GZP9 239 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 IQCGQ9H095 443 aaKnown RBP13.01□□□□□ -0.33
SNX12-205ENST00000490561 VPS11Q9H270 941 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 DPEP2Q9H4A9 486 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 COG4Q9H9E3 785 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 NMRAL1Q9HBL8 299 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 PCMTD2Q9NV79 361 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 DCDC2Q9UHG0 476 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 NOVA2Q9UNW9 492 aaKnown RBP13.01□□□□□ -0.33
SNX12-205ENST00000490561 SMG5Q9UPR3 1016 aaKnown RBP13.01□□□□□ -0.33
SNX12-205ENST00000490561 VCANP13611 3396 aa13.01□□□□□ -0.33
SNX12-205ENST00000490561 CEP192Q8TEP8 1941 aa13□□□□□ -0.33
SNX12-205ENST00000490561 A0A1W2PPM1 405 aa13□□□□□ -0.33
SNX12-205ENST00000490561 SLC5A10A0PJK1 596 aa13□□□□□ -0.33
SNX12-205ENST00000490561 COPEO14579 308 aa13□□□□□ -0.33
SNX12-205ENST00000490561 YKT6O15498 198 aa13□□□□□ -0.33
SNX12-205ENST00000490561 GPC4O75487 556 aa13□□□□□ -0.33
SNX12-205ENST00000490561 SLCO2B1O94956 709 aa13□□□□□ -0.33
SNX12-205ENST00000490561 KLHL2O95198 593 aa13□□□□□ -0.33
SNX12-205ENST00000490561 SYF2O95926 243 aaKnown RBP13□□□□□ -0.33
SNX12-205ENST00000490561 LTA4HP09960 611 aaKnown RBP13□□□□□ -0.33
SNX12-205ENST00000490561 MPC1LP0DKB6 136 aa13□□□□□ -0.33
SNX12-205ENST00000490561 NME1P15531 152 aaKnown RBP13□□□□□ -0.33
SNX12-205ENST00000490561 IDSP22304 550 aa13□□□□□ -0.33
SNX12-205ENST00000490561 PBLDP30039 288 aaPredicted RBP13□□□□□ -0.33
SNX12-205ENST00000490561 CCR7P32248 378 aa13□□□□□ -0.33
SNX12-205ENST00000490561 CRHR1P34998 444 aa13□□□□□ -0.33
SNX12-205ENST00000490561 CSNK1EP49674 416 aaKnown RBP13□□□□□ -0.33
SNX12-205ENST00000490561 HNRNPKP61978 463 aaKnown RBP eCLIP13□□□□□ -0.33
SNX12-205ENST00000490561 EIF2B5Q13144 721 aaKnown RBP13□□□□□ -0.33
SNX12-205ENST00000490561 BOP1Q14137 746 aaKnown RBP13□□□□□ -0.33
SNX12-205ENST00000490561 GBX1Q14549 363 aa13□□□□□ -0.33
SNX12-205ENST00000490561 ZNF658BQ4V348 819 aaPredicted RBP13□□□□□ -0.33
SNX12-205ENST00000490561 TPRG1LQ5T0D9 272 aa13□□□□□ -0.33
SNX12-205ENST00000490561 LAIR1Q6GTX8 287 aa13□□□□□ -0.33
SNX12-205ENST00000490561 PAQR3Q6TCH7 311 aa13□□□□□ -0.33
SNX12-205ENST00000490561 KDM7AQ6ZMT4 941 aa13□□□□□ -0.33
SNX12-205ENST00000490561 CHST15Q7LFX5 561 aaPredicted RBP13□□□□□ -0.33
SNX12-205ENST00000490561 PIM3Q86V86 326 aa13□□□□□ -0.33
SNX12-205ENST00000490561 CFAP206Q8IYR0 622 aa13□□□□□ -0.33
SNX12-205ENST00000490561 MYO1HQ8N1T3 1032 aa13□□□□□ -0.33
SNX12-205ENST00000490561 TSACCQ96A04 125 aaPredicted RBP13□□□□□ -0.33
SNX12-205ENST00000490561 ARL8AQ96BM9 186 aa13□□□□□ -0.33
SNX12-205ENST00000490561 APOPT1Q96IL0 206 aa13□□□□□ -0.33
SNX12-205ENST00000490561 UBXN10Q96LJ8 280 aa13□□□□□ -0.33
SNX12-205ENST00000490561 FOPNLQ96NB1 174 aa13□□□□□ -0.33
SNX12-205ENST00000490561 MRPL40Q9NQ50 206 aaKnown RBP13□□□□□ -0.33
SNX12-205ENST00000490561 KLC4Q9NSK0 619 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms