RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ZNF771Q7L3S4 317 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 PIWIL4Q7Z3Z4 852 aaKnown RBP4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 KBTBD6Q86V97 674 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 SLC24A4Q8NFF2 622 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 LRRC8CQ8TDW0 803 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 SEMA4DQ92854 862 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 NODALQ96S42 347 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 TRMT61BQ9BVS5 477 aaKnown RBP4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 MXD3Q9BW11 206 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 ZFP57Q9NU63 452 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 GIMAP4Q9NUV9 329 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 MIOSQ9NXC5 875 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 RPS6KA6Q9UK32 745 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 PLAGL1Q9UM63 463 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 ZNF148Q9UQR1 794 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 JRKLQ9Y4A0 524 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 SNX8Q9Y5X2 465 aa4.65□□□□□ -1.67
HMGB1P38-201ENST00000490557 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 A0A1W2PR77 199 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 A6NL46 340 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 P2RY10O00398 339 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 TCERG1O14776 1098 aaKnown RBP4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 TIMM44O43615 452 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 AHCYL1O43865 530 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 IGHV4-39P01824 125 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 TUBBP07437 444 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 PRSS1P07477 247 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 LDHCP07864 332 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 PRLRP16471 622 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 ACSL1P33121 698 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 RPL24P83731 157 aaKnown RBP4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 RBBP5Q15291 538 aaKnown RBP4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 HAUS6Q7Z4H7 955 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 CUZD1Q86UP6 607 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 AACSQ86V21 672 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 PTOV1Q86YD1 416 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 CNPY4Q8N129 248 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 SMPDL3BQ92485 455 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 ERLEC1Q96DZ1 483 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 MTERF3Q96E29 417 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 STAMBPL1Q96FJ0 436 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 SCRN2Q96FV2 425 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 ZNF354BQ96LW1 612 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 MMP28Q9H239 520 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 SLC38A7Q9NVC3 462 aa4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 CPSF2Q9P2I0 782 aaKnown RBP4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 PPIEQ9UNP9 301 aaKnown RBP4.64□□□□□ -1.67
HMGB1P38-201ENST00000490557 A0A0G2JNG1 304 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 IPO8O15397 1037 aaKnown RBP4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 PAPSS1O43252 624 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 CTSVO60911 334 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 ENTPD3O75355 529 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 ZWINTO95229 277 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 COPB2P35606 906 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 NNMTP40261 264 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 RPS18P62269 152 aaKnown RBP4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 SIRPAP78324 504 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 POU5F1Q01860 360 aaKnown RBP4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 MBTD1Q05BQ5 628 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 CXCL9Q07325 125 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 KIR2DS5Q14953 304 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 C9orf50Q5SZB4 431 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 GCNT6Q5T4J0 391 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 KRT79Q5XKE5 535 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 DHRS7BQ6IAN0 325 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 KLC3Q6P597 504 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 C19orf48Q6RUI8 117 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 PLXDC2Q6UX71 529 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 BRINP3Q76B58 766 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 DCUN1D3Q8IWE4 304 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 RBM15BQ8NDT2 890 aaKnown RBP4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 PRPF31Q8WWY3 499 aaKnown RBP4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 DNASE2BQ8WZ79 361 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 ST6GAL2Q96JF0 529 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 FAM81BQ96LP2 452 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 SPATC1LQ9H0A9 340 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 KCNK15Q9H427 330 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 HHATLQ9HCP6 504 aa4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 ZNF334Q9HCZ1 680 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 LARSQ9P2J5 1176 aaKnown RBP4.63□□□□□ -1.67
HMGB1P38-201ENST00000490557 CTAGE9A4FU28 777 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 SSX4O60224 188 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 GPR137BO60478 399 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 PRAMEF11O60813 436 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 BAG4O95429 457 aaKnown RBP4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 LDLRP01130 860 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 H1F0P07305 194 aaKnown RBP4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 CTAGE8P0CG41 777 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 SELLP14151 372 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 MARK3P27448 753 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 KCTD2Q14681 263 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 RAB6CQ53S08 254 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 CCNYL2Q5T2Q4 361 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 CTAGE4Q8IX94 777 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 AFAP1Q8N556 730 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 SLC22A18Q96BI1 424 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 PRMT6Q96LA8 375 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 CDRT15Q96T59 188 aa4.62□□□□□ -1.67
HMGB1P38-201ENST00000490557 RAB6CQ9H0N0 254 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms