RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SKIDA1Q1XH10 827 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 METRNLQ641Q3 311 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 ZNF449Q6P9G9 518 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 CEACAM20Q6UY09 585 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 TAS2R42Q7RTR8 314 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 C1orf54Q8WWF1 131 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 SLC39A7Q92504 469 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 C9orf72Q96LT7 481 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 TGM7Q96PF1 710 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 FAM96AQ9H5X1 160 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 NLE1Q9NVX2 485 aaPredicted RBP17.1■□□□□ 0.33
SEC13-218ENST00000490283 ZDHHC3Q9NYG2 299 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 FAM8A1Q9UBU6 413 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 B3GALT1Q9Y5Z6 326 aa17.1■□□□□ 0.33
SEC13-218ENST00000490283 AGAP14A8MT82 685 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 H7C0S8 307 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 CCL22O00626 93 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 CAPN5O15484 640 aaPredicted RBP17.09■□□□□ 0.33
SEC13-218ENST00000490283 C9P02748 559 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 ATP1B2P14415 290 aaPredicted RBP17.09■□□□□ 0.33
SEC13-218ENST00000490283 GFERP55789 205 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 MC2RQ01718 297 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 SNX1Q13596 522 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 KRT33BQ14525 404 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 GSE1Q14687 1217 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 ANKS6Q68DC2 871 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 IRGCQ6NXR0 463 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 CYB5D1Q6P9G0 228 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 FAM83HQ6ZRV2 1179 aaPredicted RBP17.09■□□□□ 0.33
SEC13-218ENST00000490283 DTX1Q86Y01 620 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 IL22RA1Q8N6P7 574 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 HM13Q8TCT9 377 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.09■□□□□ 0.33
SEC13-218ENST00000490283 LINC00615Q96LM1 132 aaPredicted RBP17.09■□□□□ 0.33
SEC13-218ENST00000490283 C12orf66Q96MD2 445 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 BBC3Q96PG8 261 aaPredicted RBP17.09■□□□□ 0.33
SEC13-218ENST00000490283 WWP1Q9H0M0 922 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 OGFRQ9NZT2 677 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 PAK5Q9P286 719 aa17.09■□□□□ 0.33
SEC13-218ENST00000490283 POLR1CO15160 346 aaPredicted RBP17.08■□□□□ 0.32
SEC13-218ENST00000490283 MTHFD1P11586 935 aaKnown RBP17.08■□□□□ 0.32
SEC13-218ENST00000490283 ACRV1P26436 265 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 PRLHRP49683 370 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 CACNG1Q06432 222 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 VASH2Q86V25 355 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 SERPINA9Q86WD7 417 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 CFAP206Q8IYR0 622 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 BMPERQ8N8U9 685 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 OR52K1Q8NGK4 314 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 JPH3Q8WXH2 748 aaPredicted RBP17.08■□□□□ 0.32
SEC13-218ENST00000490283 RSC1A1Q92681 617 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 TTC1Q99614 292 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 CCM2Q9BSQ5 444 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 ETNK1Q9HBU6 452 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 FBXO8Q9NRD0 319 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 RAB6BQ9NRW1 208 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 PIH1D1Q9NWS0 290 aaKnown RBP17.08■□□□□ 0.32
SEC13-218ENST00000490283 ZKSCAN5Q9Y2L8 839 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 HEBP2Q9Y5Z4 205 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 COLEC10Q9Y6Z7 277 aa17.08■□□□□ 0.32
SEC13-218ENST00000490283 HEATR9A2RTY3 570 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 EFSO43281 561 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 POLBP06746 335 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 NDUFS1P28331 727 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 SEPHS1P49903 392 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 FOXM1Q08050 763 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 CCNG2Q16589 344 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 CACHD1Q5VU97 1274 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 ARMC6Q6NXE6 501 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 C4orf22Q6V702 233 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 GSTA5Q7RTV2 222 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 CACNA2D3Q8IZS8 1091 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 GPR150Q8NGU9 434 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 ZFPM2Q8WW38 1151 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 PMEPA1Q969W9 287 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 WBP1Q96G27 269 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 CDKN2AIPNLQ96HQ2 116 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 CTRCQ99895 268 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 ZNF768Q9H5H4 540 aaKnown RBP17.07■□□□□ 0.32
SEC13-218ENST00000490283 EPHA6Q9UF33 1036 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 AHCTF1Q8WYP5 2266 aa17.07■□□□□ 0.32
SEC13-218ENST00000490283 TRBV5-4A0A0C4DH59 114 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 C17orf113A0A1B0GUU1 675 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 CCDC78A2IDD5 438 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 F8W8V4 182 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 QSOX1O00391 747 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 IFRD1O00458 451 aaPredicted RBP17.06■□□□□ 0.32
SEC13-218ENST00000490283 RAD1O60671 282 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 SUN1O94901 812 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 FGGP02679 453 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 APRTP07741 180 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 GSTM1P09488 218 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
SEC13-218ENST00000490283 LEPRP48357 1165 aaKnown RBP17.06■□□□□ 0.32
SEC13-218ENST00000490283 CCZ1BP86790 482 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 CCZ1P86791 482 aaPredicted RBP17.06■□□□□ 0.32
SEC13-218ENST00000490283 GSTM4Q03013 218 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 SEMA5AQ13591 1074 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 FAM92BQ6ZTR7 304 aa17.06■□□□□ 0.32
SEC13-218ENST00000490283 NLRP9Q7RTR0 991 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms