RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SPATA20Q8TB22 786 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 WDR20Q8TBZ3 569 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 PTERQ96BW5 349 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 DGAT2Q96PD7 388 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 NEK1Q96PY6 1258 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 TXLNGYQ9BZA5 131 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 RETREG1Q9H6L5 497 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 TAB2Q9NYJ8 693 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 NRBP1Q9UHY1 535 aa3.77□□□□□ -1.81
CD46-216ENST00000490278 KAT6BQ8WYB5 2073 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 A0A1W2PS18 150 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 CTAGE9A4FU28 777 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 DVL1O14640 695 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 SSX4O60224 188 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 DNTTP04053 509 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 CENPBP07199 599 aaPredicted RBP3.76□□□□□ -1.81
CD46-216ENST00000490278 CTAGE8P0CG41 777 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 DGKAP23743 735 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 GAS1P54826 345 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 PITX1P78337 314 aaPredicted RBP3.76□□□□□ -1.81
CD46-216ENST00000490278 POU3F1Q03052 451 aaPredicted RBP3.76□□□□□ -1.81
CD46-216ENST00000490278 ILF3Q12906 894 aaKnown RBP eCLIP3.76□□□□□ -1.813e-9■■□□□ 14.3
CD46-216ENST00000490278 PRPF4BQ13523 1007 aaKnown RBP3.76□□□□□ -1.81
CD46-216ENST00000490278 TMEM266Q2M3C6 531 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 ADALQ6DHV7 355 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 WBP2NLQ6ICG8 309 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 SLC9B2Q86UD5 537 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 ADIPOR2Q86V24 386 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 CTAGE4Q8IX94 777 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 FBXO39Q8N4B4 442 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 AFAP1Q8N556 730 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 POGLUT1Q8NBL1 392 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 POC1AQ8NBT0 407 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 KCTD6Q8NC69 237 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 TAS1R2Q8TE23 839 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 SMPDL3BQ92485 455 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 ERLEC1Q96DZ1 483 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 LINGO1Q96FE5 620 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 OXNAD1Q96HP4 312 aaPredicted RBP3.76□□□□□ -1.81
CD46-216ENST00000490278 ABHD8Q96I13 439 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 LRRC1Q9BTT6 524 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 POLR3CQ9BUI4 534 aaPredicted RBP3.76□□□□□ -1.81
CD46-216ENST00000490278 CCDC106Q9BWC9 280 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 MOV10L1Q9BXT6 1211 aaKnown RBP3.76□□□□□ -1.81
CD46-216ENST00000490278 HHATLQ9HCP6 504 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 GDE1Q9NZC3 331 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 CRNNQ9UBG3 495 aaPredicted RBP3.76□□□□□ -1.81
CD46-216ENST00000490278 ZNF711Q9Y462 761 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 TRPV2Q9Y5S1 764 aa3.76□□□□□ -1.81
CD46-216ENST00000490278 C5orf60A6NFR6 353 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 TO15178 435 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 IPO8O15397 1037 aaKnown RBP3.75□□□□□ -1.81
CD46-216ENST00000490278 LDLRP01130 860 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 TFAP2AP05549 437 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 KRT19P08727 400 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 MCCP23508 829 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 CAPZA2P47755 286 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 ERVFC1-1P60608 527 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 UBXN2AP68543 259 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 AIMP1Q12904 312 aaKnown RBP3.75□□□□□ -1.81
CD46-216ENST00000490278 GAGE5Q13069 117 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 GAGE6Q13070 117 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 PLA2G7Q13093 441 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 NR1D2Q14995 579 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 RASA2Q15283 850 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 CBWD6Q4V339 395 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 CBWD3Q5JTY5 395 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 GCNT6Q5T4J0 391 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 TEX38Q6PEX7 206 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 PLXDC2Q6UX71 529 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 FOXL2NBQ6ZUU3 175 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 KCTD8Q6ZWB6 473 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 DSG4Q86SJ6 1040 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 RFLNBQ8N5W9 214 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 MAB21L3Q8N8X9 362 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 RBM15BQ8NDT2 890 aaKnown RBP3.75□□□□□ -1.81
CD46-216ENST00000490278 TSPAN14Q8NG11 270 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 SEMA4DQ92854 862 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 CD101Q93033 1021 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 PRMT6Q96LA8 375 aaPredicted RBP3.75□□□□□ -1.81
CD46-216ENST00000490278 FAM81BQ96LP2 452 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 ZNF582Q96NG8 517 aaPredicted RBP3.75□□□□□ -1.81
CD46-216ENST00000490278 OR6C1Q96RD1 312 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 CTAGE1Q96RT6 745 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 PKP4Q99569 1192 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 SLA2Q9H6Q3 261 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 TRPC7Q9HCX4 862 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 ABCF3Q9NUQ8 709 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 ANAPC2Q9UJX6 822 aa3.75□□□□□ -1.81
CD46-216ENST00000490278 A0A0G2JNG1 304 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 TCRBV21S2A2A0A5A6 115 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 C16orf97H3BN30 126 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 BUB3O43684 328 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 SYNGR3O43761 229 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 GPR137BO60478 399 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 PDE9AO76083 593 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 GCNT3O95395 438 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 LIPFP07098 398 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 CETPP11597 493 aa3.74□□□□□ -1.81
CD46-216ENST00000490278 CSF2RAP15509 400 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms