RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TBC1D29Q9UFV1 150 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 SEC63Q9UGP8 760 aaKnown RBP4.83□□□□□ -1.64
CCDC39-206ENST00000489868 ACAD8Q9UKU7 415 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 PNMA2Q9UL42 364 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 ZNF215Q9UL58 517 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-206ENST00000489868 EXO1Q9UQ84 846 aaKnown RBP4.83□□□□□ -1.64
CCDC39-206ENST00000489868 TCF19Q9Y242 345 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 JRKLQ9Y4A0 524 aa4.83□□□□□ -1.64
CCDC39-206ENST00000489868 A0A1W2PQ09 198 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 LNP1A1A4G5 178 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 SLC22A2O15244 555 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 NDUFS4O43181 175 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 CIDEAO60543 219 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 ZG16O60844 167 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 PATE4P0C8F1 98 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 THOP1P52888 689 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 AIMP2Q13155 320 aaKnown RBP4.82□□□□□ -1.64
CCDC39-206ENST00000489868 ZC2HC1CQ53FD0 456 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-206ENST00000489868 ARHGAP17Q68EM7 881 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 SLC35E4Q6ICL7 350 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 CEACAM20Q6UY09 585 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 CRYBG2Q8N1P7 616 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 ZNF843Q8N446 348 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 TM9SF4Q92544 642 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 STAMBPL1Q96FJ0 436 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 PRMT6Q96LA8 375 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-206ENST00000489868 TBC1D22BQ9NU19 505 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 SLC38A7Q9NVC3 462 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 ZNF624Q9P2J8 865 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-206ENST00000489868 SUCLA2Q9P2R7 463 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-206ENST00000489868 ERRFI1Q9UJM3 462 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-206ENST00000489868 PLAGL1Q9UM63 463 aa4.82□□□□□ -1.64
CCDC39-206ENST00000489868 H0YIN7 160 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 NR3C1P04150 777 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 SLC15A1P46059 708 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 PSMC6P62333 389 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 CXCL9Q07325 125 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 GAGE2BQ13066 116 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 MEA1Q16626 185 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 GAGE2EQ4V326 116 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 FAM109BQ6ICB4 259 aaPredicted RBP4.81□□□□□ -1.64
CCDC39-206ENST00000489868 GAGE2AQ6NT46 116 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 TRPT1Q86TN4 253 aaKnown RBP4.81□□□□□ -1.64
CCDC39-206ENST00000489868 TMTC2Q8N394 836 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 STPG4Q8N801 248 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 FBXO17Q96EF6 278 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 F2RL3Q96RI0 385 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 SYNCQ9H7C4 482 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 MIOSQ9NXC5 875 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 TAS2R14Q9NYV8 317 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 GAGE2DQ9UEU5 116 aa4.81□□□□□ -1.64
CCDC39-206ENST00000489868 OR2A25A4D2G3 310 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 SMIM1B2RUZ4 78 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 TO15178 435 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 CREG1O75629 220 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 INHBAP08476 426 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 ACP2P11117 423 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 NR2C2P49116 596 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-206ENST00000489868 FAM98BQ52LJ0 330 aaKnown RBP4.8□□□□□ -1.64
CCDC39-206ENST00000489868 HYIQ5T013 277 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 SFMBT2Q5VUG0 894 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 RBMS3Q6XE24 437 aaKnown RBP4.8□□□□□ -1.64
CCDC39-206ENST00000489868 DENND5BQ6ZUT9 1274 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 MCEMP1Q8IX19 187 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 TRIM58Q8NG06 486 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 OLIG1Q8TAK6 271 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 GRAPLQ8TC17 118 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-206ENST00000489868 SAT2Q96F10 170 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-206ENST00000489868 DENND2DQ9H6A0 471 aaPredicted RBP4.8□□□□□ -1.64
CCDC39-206ENST00000489868 HAUS2Q9NVX0 235 aa4.8□□□□□ -1.64
CCDC39-206ENST00000489868 DDX43Q9NXZ2 648 aaKnown RBP4.8□□□□□ -1.64
CCDC39-206ENST00000489868 LAS1LQ9Y4W2 734 aaKnown RBP4.8□□□□□ -1.64
CCDC39-206ENST00000489868 ASTN2O75129 1339 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-206ENST00000489868 FLT1P17948 1338 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 PRSS51A0A1B0GVH4 220 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 DUXAA6NLW8 204 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 C15orf62A8K5M9 175 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 PRSS47A8MTI9 375 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 CTDSP2O14595 271 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 GPR137BO60478 399 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 CD48P09326 243 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 ERVK-10P10266 1014 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 CKMT2P17540 419 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 ACSL1P33121 698 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 NR0B1P51843 470 aaKnown RBP4.79□□□□□ -1.64
CCDC39-206ENST00000489868 TUBB4BP68371 445 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 PNRC1Q12796 327 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-206ENST00000489868 MFAP5Q13361 173 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 PLEKHS1Q5SXH7 462 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 GALNT5Q7Z7M9 940 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 L3MBTL4Q8NA19 623 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
CCDC39-206ENST00000489868 FAM76AQ8TAV0 307 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 DAZLQ92904 295 aaKnown RBP4.79□□□□□ -1.64
CCDC39-206ENST00000489868 MOAP1Q96BY2 351 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 ERLEC1Q96DZ1 483 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 LITAFQ99732 161 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 SDF4Q9BRK5 362 aa4.79□□□□□ -1.64
CCDC39-206ENST00000489868 C16orf70Q9BSU1 422 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms