RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 KRT33BQ14525 404 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 GSE1Q14687 1217 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 ZNF449Q6P9G9 518 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 KLHL35Q6PF15 583 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 INO80CQ6PI98 192 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-217ENST00000489719 GSTA5Q7RTV2 222 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 SERPINA9Q86WD7 417 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 ZDHHC12Q96GR4 267 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 LINC00615Q96LM1 132 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-217ENST00000489719 C9orf72Q96LT7 481 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 TGM7Q96PF1 710 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 CCM2Q9BSQ5 444 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 WWP1Q9H0M0 922 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 FAM8A1Q9UBU6 413 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 ZKSCAN5Q9Y2L8 839 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 B3GALT1Q9Y5Z6 326 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 NBEAQ8NFP9 2946 aa17.47■□□□□ 0.39
ABCF3-217ENST00000489719 ZFYVE26Q68DK2 2539 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 MROH6A6NGR9 719 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 RASSF9O75901 435 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 SUN1O94901 812 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 FGGP02679 453 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 CDKN1CP49918 316 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-217ENST00000489719 RHDQ02161 417 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 DRICH1Q6PGQ1 229 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-217ENST00000489719 CEACAM20Q6UY09 585 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 C4orf22Q6V702 233 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 NAT14Q8WUY8 206 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 ZFPM2Q8WW38 1151 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 C12orf66Q96MD2 445 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 TEFMQ96QE5 360 aaKnown RBP17.46■□□□□ 0.39
ABCF3-217ENST00000489719 INSM2Q96T92 566 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-217ENST00000489719 TLR10Q9BXR5 811 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 VPS37BQ9H9H4 285 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 FBXO8Q9NRD0 319 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 HOMER3Q9NSC5 361 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 IMP3Q9NV31 184 aaKnown RBP17.46■□□□□ 0.39
ABCF3-217ENST00000489719 OGFRQ9NZT2 677 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 COLEC10Q9Y6Z7 277 aa17.46■□□□□ 0.39
ABCF3-217ENST00000489719 C17orf113A0A1B0GUU1 675 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 CCDC78A2IDD5 438 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 HEATR9A2RTY3 570 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 TOX3O15405 576 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 C9P02748 559 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 APRTP07741 180 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 SLC35G4P0C7Q5 338 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 MTHFD1P11586 935 aaKnown RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 ADRA1DP25100 572 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 ACRV1P26436 265 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 RPL22P35268 128 aaKnown RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 ATP1A2P50993 1020 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 GFERP55789 205 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 SEMA5AQ13591 1074 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 PLCL1Q15111 1095 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 CCDC38Q502W7 563 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 TAF1BQ53T94 588 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 ANKS6Q68DC2 871 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 IRGCQ6NXR0 463 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 PRUNE1Q86TP1 453 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 DTX1Q86Y01 620 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 BMPERQ8N8U9 685 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 ZSCAN1Q8NBB4 408 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 LSM14AQ8ND56 463 aaKnown RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 SNRNP27Q8WVK2 155 aaKnown RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 JPH3Q8WXH2 748 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 TTC1Q99614 292 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 ZPBPQ9BS86 351 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 GRPEL1Q9HAV7 217 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 SMARCAL1Q9NZC9 954 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 EPHA6Q9UF33 1036 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 CFAP20Q9Y6A4 193 aaKnown RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 KIF26BQ2KJY2 2108 aa17.45■□□□□ 0.38
ABCF3-217ENST00000489719 MN1Q10571 1320 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-217ENST00000489719 TRBV5-4A0A0C4DH59 114 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 POLR1CO15160 346 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-217ENST00000489719 ATXN7O15265 892 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-217ENST00000489719 EFSO43281 561 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 SGTAO43765 313 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 ANKRD34CP0C6C1 535 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 ZSCAN5DPP0CG00 497 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
ABCF3-217ENST00000489719 CXCR5P32302 372 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 CAPZBP47756 277 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 PRLHRP49683 370 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 SEPHS1P49903 392 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 SIX1Q15475 284 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-217ENST00000489719 CACHD1Q5VU97 1274 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 NLRP9Q7RTR0 991 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 IL22RA1Q8N6P7 574 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 HM13Q8TCT9 377 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 RSC1A1Q92681 617 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.44■□□□□ 0.38
ABCF3-217ENST00000489719 BBC3Q96PG8 261 aaPredicted RBP17.44■□□□□ 0.38
ABCF3-217ENST00000489719 CTRCQ99895 268 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 HEBP2Q9Y5Z4 205 aa17.44■□□□□ 0.38
ABCF3-217ENST00000489719 IGLV3-16A0A075B6K0 115 aa17.43■□□□□ 0.38
ABCF3-217ENST00000489719 GOLGA6L3A6NEY3 463 aa17.43■□□□□ 0.38
ABCF3-217ENST00000489719 ERVH48-1M5A8F1 160 aa17.43■□□□□ 0.38
ABCF3-217ENST00000489719 TK2O00142 265 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms