RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 NXPE3Q969Y0 559 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 FUBP1Q96AE4 644 aaKnown RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 TCEAL4Q96EI5 215 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF641Q96N77 438 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF570Q96NI8 536 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 NR1H4Q96RI1 486 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 CPEB1Q9BZB8 566 aaKnown RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 GPR63Q9BZJ6 419 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SUDS3Q9H7L9 328 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 WDR41Q9HAD4 459 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 TRPV4Q9HBA0 871 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 LATS2Q9NRM7 1088 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 NMRK1Q9NWW6 199 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 ZDHHC3Q9NYG2 299 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 GDE1Q9NZC3 331 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 NUDT4Q9NZJ9 180 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 TBC1D14Q9P2M4 693 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 SUCOQ9UBS9 1254 aaKnown RBP8.36□□□□□ -1.07
VTI1A-207ENST00000489357 GNPTGQ9UJJ9 305 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 CDH7Q9ULB5 785 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 MED16Q9Y2X0 877 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 DHRS7Q9Y394 339 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 PCDHGC4Q9Y5F7 938 aa8.36□□□□□ -1.07
VTI1A-207ENST00000489357 MYOFQ9NZM1 2061 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 LOC100653049A0A140TA62 436 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 NEMP2A6NFY4 417 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 MEI4A8MW99 385 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 E5RI56 91 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 TRIM38O00635 465 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF197O14709 1029 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 TSPAN3O60637 253 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 KRT34O76011 436 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 CDK14O94921 469 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ESRRBO95718 433 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 SLC4A1P02730 911 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 CKMP06732 381 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 UROSP10746 265 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 IRF1P10914 325 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 LBPP18428 481 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ME2P23368 584 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 GABRR2P28476 465 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 MZF1P28698 734 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PIK3CGP48736 1102 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 POLR2LP62875 67 aaKnown RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 CLCQ05315 142 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 KLC1Q07866 573 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PEX6Q13608 980 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 FASTKQ14296 549 aaKnown RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PCBP2Q15366 365 aaKnown RBP eCLIP8.35□□□□□ -1.074e-7■■■■■ 37
VTI1A-207ENST00000489357 OR4D1Q15615 310 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PLEKHG6Q3KR16 790 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 SETMARQ53H47 684 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ARHGAP15Q53QZ3 475 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PAQR3Q6TCH7 311 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 LDB1Q86U70 411 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PIM3Q86V86 326 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 NPAS3Q8IXF0 933 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 SPATA6LQ8N4H0 392 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PCDH20Q8N6Y1 951 aaKnown RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 OR56A4Q8NGH8 313 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PIP4K2CQ8TBX8 421 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 AGR3Q8TD06 166 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 CD200R1Q8TD46 325 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF483Q8TF39 744 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 DDI1Q8WTU0 396 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 FGF13Q92913 245 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ULK4Q96C45 1275 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ECHDC3Q96DC8 303 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ASB9Q96DX5 294 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PHF21BQ96EK2 531 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 SGF29Q96ES7 293 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 DUS3LQ96G46 650 aaKnown RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PLEKHG4BQ96PX9 1271 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF382Q96SR6 550 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 GPR21Q99679 349 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 HOPXQ9BPY8 73 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 CORO1BQ9BR76 489 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 SLC2A11Q9BYW1 496 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 CLPBQ9H078 707 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 MUC13Q9H3R2 512 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ZFYVE1Q9HBF4 777 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 CYP4F12Q9HCS2 524 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 SPAG4Q9NPE6 437 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ASAH2Q9NR71 780 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 SDR39U1Q9NRG7 319 aaPredicted RBP8.35□□□□□ -1.07
VTI1A-207ENST00000489357 RAD18Q9NS91 495 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 RIC8BQ9NVN3 520 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 SMPD4Q9NXE4 827 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 NDUFAF1Q9Y375 327 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 HCN4Q9Y3Q4 1203 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 DNAJC15Q9Y5T4 150 aa8.35□□□□□ -1.07
VTI1A-207ENST00000489357 ZDBF2Q9HCK1 2354 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 SCN8AQ9UQD0 1980 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 FAM86C2PA6NEL3 165 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 SUPT3HB4E1H0 165 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 H0YJX3 145 aa8.34□□□□□ -1.07
VTI1A-207ENST00000489357 IFRD1O00458 451 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-207ENST00000489357 BTN3A1O00481 513 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms