RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MAPK10P53779 464 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 TERF1P54274 439 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 CLCA4Q14CN2 919 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 CYP1B1Q16678 543 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 FASTKD1Q53R41 847 aaKnown RBP14□□□□□ -0.17
BRCA1-218ENST00000489037 AARS2Q5JTZ9 985 aaKnown RBP14□□□□□ -0.17
BRCA1-218ENST00000489037 SNAP47Q5SQN1 464 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 BROXQ5VW32 411 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 LRRC8BQ6P9F7 803 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 CERS6Q6ZMG9 384 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 ZNF574Q6ZN55 896 aaPredicted RBP14□□□□□ -0.17
BRCA1-218ENST00000489037 TMPRSS9Q7Z410 1059 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 AGBL5Q8NDL9 886 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 OR4L1Q8NH43 312 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 COG1Q8WTW3 980 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 HNRNPLLQ8WVV9 542 aaKnown RBP14□□□□□ -0.17
BRCA1-218ENST00000489037 PRR11Q96HE9 360 aaPredicted RBP14□□□□□ -0.17
BRCA1-218ENST00000489037 TBC1D10AQ9BXI6 508 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 SLC40A1Q9NP59 571 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 ASCL3Q9NQ33 180 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 EIF2AK3Q9NZJ5 1116 aaKnown RBP14□□□□□ -0.17
BRCA1-218ENST00000489037 HEBP2Q9Y5Z4 205 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 IGLV3-16A0A075B6K0 115 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 A0A1W2PNU3 283 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-218ENST00000489037 IFRD1O00458 451 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-218ENST00000489037 UBXN7O94888 489 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 POLBP06746 335 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 THRAP10827 490 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 HGFP14210 728 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 MPSTP25325 297 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 FNTAP49354 379 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 ARSDP51689 593 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 C16orf72Q14CZ0 275 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 PPP1R7Q15435 360 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 RPE65Q16518 533 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 DBN1Q16643 649 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 TTC27Q6P3X3 843 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 KLHL35Q6PF15 583 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 FAM83HQ6ZRV2 1179 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-218ENST00000489037 RCBTB1Q8NDN9 531 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 OR13J1Q8NGT2 312 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 KCNE4Q8WWG9 221 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 C12orf66Q96MD2 445 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 NAPGQ99747 312 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-218ENST00000489037 WWP1Q9H0M0 922 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 CHRAC1Q9NRG0 131 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 IMP3Q9NV31 184 aaKnown RBP13.99□□□□□ -0.17
BRCA1-218ENST00000489037 SLC2A6Q9UGQ3 507 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 WDR37Q9Y2I8 494 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 COLEC10Q9Y6Z7 277 aa13.99□□□□□ -0.17
BRCA1-218ENST00000489037 KMT2BQ9UMN6 2715 aaPredicted RBP13.99□□□□□ -0.17
BRCA1-218ENST00000489037 CTAGE9A4FU28 777 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 OR51F1A6NGY5 319 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 USP27XA6NNY8 438 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 A8MU76 341 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 CDRT15L2A8MXV6 281 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 ZNF185O15231 689 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 KRT37O76014 449 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 FTH1P02794 183 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 OR56A5P0C7T3 313 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 PRSS56P0CW18 603 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 MTHFD1P11586 935 aaKnown RBP13.98□□□□□ -0.17
BRCA1-218ENST00000489037 TYRP1P17643 537 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 MGAT1P26572 445 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 NDUFS1P28331 727 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 FOXN2P32314 431 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 CSF2RBP32927 897 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 ACVR1Q04771 509 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 GPR18Q14330 331 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 PLCL1Q15111 1095 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 C19orf48Q6RUI8 117 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 CLEC14AQ86T13 490 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 PIANPQ8IYJ0 282 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 NAT14Q8WUY8 206 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 ZFPM2Q8WW38 1151 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 NAF1Q96HR8 494 aaKnown RBP13.98□□□□□ -0.17
BRCA1-218ENST00000489037 TSSK1BQ9BXA7 367 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 DPH1Q9BZG8 443 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 CATSPERZQ9NTU4 200 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 WDR70Q9NW82 654 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 SAMD15Q9P1V8 674 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 KLHL3Q9UH77 587 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 PYCARDQ9ULZ3 195 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 PCDHGA7Q9Y5G6 932 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 AHCTF1Q8WYP5 2266 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 PKD1L2Q7Z442 2459 aa13.98□□□□□ -0.17
BRCA1-218ENST00000489037 PFDN6O15212 129 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 NVLO15381 856 aaKnown RBP13.97□□□□□ -0.17
BRCA1-218ENST00000489037 SGTAO43765 313 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 ITIH1P19827 911 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 SLC5A2P31639 672 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 PAFAH1B1P43034 410 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 TTPAP49638 278 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 CRADDP78560 199 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 CFHR1Q03591 330 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 RPA4Q13156 261 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 KCNJ11Q14654 390 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 ARMC3Q5W041 872 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 CASC4Q6P4E1 433 aa13.97□□□□□ -0.17
BRCA1-218ENST00000489037 PACS1Q6VY07 963 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms