RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 FAM237AA0A1B0GTK4 181 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 hCG_1642624A0A1W2PR95 340 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 SNAP23O00161 211 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 KLF11O14901 512 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 SEC31AO94979 1220 aaKnown RBP2.17□□□□□ -2.06
CCDC93-209ENST00000488908 PRB2P02812 416 aaPredicted RBP2.17□□□□□ -2.06
CCDC93-209ENST00000488908 PIK3R1P27986 724 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 PDCD2Q16342 344 aaPredicted RBP2.17□□□□□ -2.06
CCDC93-209ENST00000488908 PNLIPRP3Q17RR3 467 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 SLC9B1Q4ZJI4 515 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 DMKNQ6E0U4 476 aaPredicted RBP2.17□□□□□ -2.06
CCDC93-209ENST00000488908 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.17□□□□□ -2.06
CCDC93-209ENST00000488908 HM13Q8TCT9 377 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 NSL1Q96IY1 281 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 PYM1Q9BRP8 204 aaKnown RBP2.17□□□□□ -2.06
CCDC93-209ENST00000488908 KIF9Q9HAQ2 790 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 TAB2Q9NYJ8 693 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 THEGQ9P2T0 379 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 COPG2Q9UBF2 871 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 HAO1Q9UJM8 370 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 WDR37Q9Y2I8 494 aa2.17□□□□□ -2.06
CCDC93-209ENST00000488908 KANSL1LA0AUZ9 987 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 LDLRAD4O15165 306 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 ATP6V0E1O15342 81 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 PLIN1O60240 522 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 KCNK5O95279 499 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 PIK3CAP42336 1068 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 TBX4P57082 545 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 CD81P60033 236 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 RPS18P62269 152 aaKnown RBP2.16□□□□□ -2.06
CCDC93-209ENST00000488908 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.16□□□□□ -2.06
CCDC93-209ENST00000488908 GSTA3Q16772 222 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 HSP90AB2PQ58FF8 381 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 ZNF805Q5CZA5 627 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 FBXO47Q5MNV8 452 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 KCNMB4Q86W47 210 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 VPS37AQ8NEZ2 397 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 OR5AP2Q8NGF4 316 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 DYRK2Q92630 601 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 SLCO2A1Q92959 643 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 ARSGQ96EG1 525 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 TMEM68Q96MH6 324 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 TMEM39BQ9GZU3 492 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 ZNF700Q9H0M5 742 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 BRF2Q9HAW0 419 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 PPP1R14DQ9NXH3 145 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 GJD2Q9UKL4 321 aa2.16□□□□□ -2.06
CCDC93-209ENST00000488908 LAS1LQ9Y4W2 734 aaKnown RBP2.16□□□□□ -2.06
CCDC93-209ENST00000488908 CCDC194A0A1B0GVG4 234 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 JRKO75564 520 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 HPRP00739 348 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 IL7RP16871 459 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 MMP12P39900 470 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 PRCPP42785 496 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 LGALS3BPQ08380 585 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 OLIG2Q13516 323 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 CAMK1Q14012 370 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 TAF13Q15543 124 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 NAA35Q5VZE5 725 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 GSTA5Q7RTV2 222 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 CRYBG2Q8N1P7 616 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 RASGEF1CQ8N431 466 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 L3MBTL4Q8NA19 623 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 Q8NBF4 154 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 ZNF519Q8TB69 540 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 MIPOL1Q8TD10 442 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 GTF3C6Q969F1 213 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 KIF1BPQ96EK5 621 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 PRKRIP1Q9H875 184 aaPredicted RBP2.15□□□□□ -2.07
CCDC93-209ENST00000488908 TMEM184BQ9Y519 407 aaPredicted RBP2.15□□□□□ -2.07
CCDC93-209ENST00000488908 MAU2Q9Y6X3 613 aa2.15□□□□□ -2.07
CCDC93-209ENST00000488908 OR2M5A3KFT3 312 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 ACOD1A6NK06 481 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 SRRM5B3KS81 715 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 ZBTB43O43298 467 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 H1F0P07305 194 aaKnown RBP2.14□□□□□ -2.07
CCDC93-209ENST00000488908 CPOXP36551 454 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 ARL4CP56559 192 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 UBE3AQ05086 875 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 CALCOCO2Q13137 446 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 CDONQ4KMG0 1287 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 CXorf66Q5JRM2 361 aaPredicted RBP2.14□□□□□ -2.07
CCDC93-209ENST00000488908 DENND5BQ6ZUT9 1274 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 PIGZQ86VD9 579 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 SLC47A2Q86VL8 602 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 HOGA1Q86XE5 327 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 LACC1Q8IV20 430 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 MARVELD2Q8N4S9 558 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 PRICKLE1Q96MT3 831 aaPredicted RBP2.14□□□□□ -2.07
CCDC93-209ENST00000488908 SEMA6AQ9H2E6 1030 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 RANBP17Q9H2T7 1088 aaKnown RBP2.14□□□□□ -2.07
CCDC93-209ENST00000488908 PIGMQ9H3S5 423 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 KCND2Q9NZV8 630 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 NYAP2Q9P242 653 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 RCC2Q9P258 522 aaKnown RBP2.14□□□□□ -2.07
CCDC93-209ENST00000488908 FBXL17Q9UF56 701 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 PPP1R3CQ9UQK1 317 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 NTNG1Q9Y2I2 539 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 CLIC4Q9Y696 253 aa2.14□□□□□ -2.07
CCDC93-209ENST00000488908 MSGN1A6NI15 193 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms