RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 DPYSL5Q9BPU6 564 aa13.92□□□□□ -0.18
COL9A2-208ENST00000488463 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-208ENST00000488463 THSD1Q9NS62 852 aa13.92□□□□□ -0.18
COL9A2-208ENST00000488463 POT1Q9NUX5 634 aa13.92□□□□□ -0.18
COL9A2-208ENST00000488463 ACSL6Q9UKU0 697 aa13.92□□□□□ -0.18
COL9A2-208ENST00000488463 LHX6Q9UPM6 363 aa13.92□□□□□ -0.18
COL9A2-208ENST00000488463 PRSS21Q9Y6M0 314 aa13.92□□□□□ -0.18
COL9A2-208ENST00000488463 MN1Q10571 1320 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 KLHL33A6NCF5 533 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 PGRMC1O00264 195 aaKnown RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 DUX1O43812 170 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 VIPP01282 170 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 C9P02748 559 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 FGF3P11487 239 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 CCL4P13236 92 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 TPSB2P20231 275 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 RBMS1P29558 406 aaKnown RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 COILP38432 576 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 PCBP4P57723 403 aaKnown RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 TLE3Q04726 772 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 SEMA3AQ14563 771 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 KCNJ11Q14654 390 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 TRIP13Q15645 432 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 TPSAB1Q15661 275 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 COL28A1Q2UY09 1125 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 ZRANB3Q5FWF4 1079 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 CAPRIN2Q6IMN6 1127 aaKnown RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 FOXR1Q6PIV2 292 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 C19orf48Q6RUI8 117 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 PACS1Q6VY07 963 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 GSTA5Q7RTV2 222 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 SPACA3Q8IXA5 215 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 BMPERQ8N8U9 685 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 OR10G6Q8NH81 332 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 HNRNPLLQ8WVV9 542 aaKnown RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 PMEPA1Q969W9 287 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 INSM2Q96T92 566 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 EPB41L1Q9H4G0 881 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 STN1Q9H668 368 aaKnown RBP13.91□□□□□ -0.18
COL9A2-208ENST00000488463 TREX1Q9NSU2 369 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 PISDQ9UG56 409 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 PSMD13Q9UNM6 376 aa13.91□□□□□ -0.18
COL9A2-208ENST00000488463 TLN1Q9Y490 2541 aaKnown RBP13.9□□□□□ -0.18
COL9A2-208ENST00000488463 C17orf113A0A1B0GUU1 675 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 C9orf172C9J069 976 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 AGRPO00253 132 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 NVLO15381 856 aaKnown RBP13.9□□□□□ -0.18
COL9A2-208ENST00000488463 KIF5CO60282 957 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 GOT2P00505 430 aaKnown RBP13.9□□□□□ -0.18
COL9A2-208ENST00000488463 PBLDP30039 288 aaPredicted RBP13.9□□□□□ -0.18
COL9A2-208ENST00000488463 SLC5A2P31639 672 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 LMAN1P49257 510 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 SESN2P58004 480 aaPredicted RBP13.9□□□□□ -0.18
COL9A2-208ENST00000488463 CRADDP78560 199 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 BASP1P80723 227 aaKnown RBP13.9□□□□□ -0.18
COL9A2-208ENST00000488463 CDK16Q00536 496 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 PCID2Q5JVF3 399 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 ANKRD22Q5VYY1 191 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 TAS2R42Q7RTR8 314 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 CAND1Q86VP6 1230 aaKnown RBP13.9□□□□□ -0.18
COL9A2-208ENST00000488463 RBM12BQ8IXT5 1001 aaKnown RBP13.9□□□□□ -0.18
COL9A2-208ENST00000488463 ZNF248Q8NDW4 579 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 HM13Q8TCT9 377 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 CPT1BQ92523 772 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 RSC1A1Q92681 617 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 MAGOHBQ96A72 148 aaKnown RBP13.9□□□□□ -0.18
COL9A2-208ENST00000488463 DCUN1D1Q96GG9 259 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 RMDN2Q96LZ7 410 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 CMKLR1Q99788 373 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 WWP1Q9H0M0 922 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 OR52A5Q9H2C5 316 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 CHRAC1Q9NRG0 131 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 ACSL5Q9ULC5 683 aa13.9□□□□□ -0.18
COL9A2-208ENST00000488463 BOD1L1Q8NFC6 3051 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 CFAP99D6REC4 459 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 OR1I1O60431 355 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 TMEM63AO94886 807 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 UBXN7O94888 489 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 KRT14P02533 472 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 RALBP11234 206 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 MTHFD1P11586 935 aaKnown RBP13.89□□□□□ -0.19
COL9A2-208ENST00000488463 ARNTP27540 789 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 CAPZBP47756 277 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 NPY2RP49146 381 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 GFERP55789 205 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 GPS1Q13098 491 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 LAMB3Q13751 1172 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 ITIH4Q14624 930 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 PAPD7Q5XG87 772 aaKnown RBP13.89□□□□□ -0.19
COL9A2-208ENST00000488463 DUS1LQ6P1R4 473 aaKnown RBP13.89□□□□□ -0.19
COL9A2-208ENST00000488463 LRRC8BQ6P9F7 803 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 CCDC137Q6PK04 289 aaKnown RBP13.89□□□□□ -0.19
COL9A2-208ENST00000488463 NLRP9Q7RTR0 991 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 TRIM48Q8IWZ4 208 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 NCSTNQ92542 709 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 NAP1L3Q99457 506 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-208ENST00000488463 KIFC1Q9BW19 673 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 B3GNT4Q9C0J1 378 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms