RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ACOT7O00154 380 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 AKR1B10O60218 316 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 OPA1O60313 960 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 MFAP3LO75121 409 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 USP12O75317 370 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 CSO75390 466 aaKnown RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 HLA-DQB2P05538 268 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ANXA6P08133 673 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 H2AFZP0C0S5 128 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ALPPL2P10696 532 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 CTSEP14091 401 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 NAT1P18440 290 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 AK4P27144 223 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 HNF1BP35680 557 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 GARSP41250 739 aaKnown RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 CSNK1DP48730 415 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 POLD2P49005 469 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 HK3P52790 923 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ITGA1P56199 1179 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 SRP54P61011 504 aaKnown RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 DYNLT1P63172 113 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 NIPAL4Q0D2K0 466 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 CCDC173Q0VFZ6 552 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 PTK2BQ14289 1009 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 RFTN1Q14699 578 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 RTP5Q14D33 572 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ACAP1Q15027 740 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 SLC18A3Q16572 532 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 HADHQ16836 314 aaKnown RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 TM4SF20Q53R12 229 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ZNF385BQ569K4 471 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 C3orf38Q5JPI3 329 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 MARC1Q5VT66 337 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 SPECC1LQ69YQ0 1117 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ZCCHC8Q6NZY4 707 aaKnown RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 BRAT1Q6PJG6 821 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 H2AFVQ71UI9 128 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 OVCH1Q7RTY7 1134 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 KDELC2Q7Z4H8 507 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 PSTKQ8IV42 348 aaKnown RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 Q8N9G6 341 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 OR8K1Q8NGG5 319 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 SLC35G2Q8TBE7 412 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ASB12Q8WXK4 309 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 CTNNBL1Q8WYA6 563 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 NUS1Q96E22 293 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ATXN7L3BQ96GX2 97 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 WDR92Q96MX6 357 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ZNF641Q96N77 438 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 NUDCD1Q96RS6 583 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 TUBGCP5Q96RT8 1024 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 AGAP2Q99490 1192 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 LGMNQ99538 433 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 EIF3CQ99613 913 aaKnown RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 MGME1Q9BQP7 344 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 YIPF4Q9BSR8 244 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 SLC13A1Q9BZW2 595 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 TMEM168Q9H0V1 697 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ABCG4Q9H172 646 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 NHEJ1Q9H9Q4 299 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 RBM22Q9NW64 420 aaKnown RBP eCLIP5.89□□□□□ -1.473e-6■■■□□ 18.6
CDHR3-213ENST00000488386 SPASTQ9UBP0 616 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 CHKBQ9Y259 395 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 PCYT1BQ9Y5K3 369 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 RAI2Q9Y5P3 530 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 PMF1-BGLAPU3KQ54 211 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 ZZEF1O43149 2961 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 A0A1B0GTL3 188 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 LRRD1A4D1F6 860 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 EME2A4GXA9 379 aaPredicted RBP5.88□□□□□ -1.47
CDHR3-213ENST00000488386 NEMP2A6NFY4 417 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 FAM90A27PA6NNH2 459 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 B4DGG1 531 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 KCNK1O00180 336 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 FFAR3O14843 346 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 INPP4BO15327 924 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 HTRA2O43464 458 aaPredicted RBP5.88□□□□□ -1.47
CDHR3-213ENST00000488386 HEXIM1O94992 359 aaKnown RBP5.88□□□□□ -1.47
CDHR3-213ENST00000488386 PGLSO95336 258 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 TNFP01375 233 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 SLC4A1P02730 911 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 C1SP09871 688 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 PIRTP0C851 137 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 HGFP14210 728 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 KDELR1P24390 212 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 HTR1BP28222 390 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 HNRNPH3P31942 346 aaKnown RBP5.88□□□□□ -1.47
CDHR3-213ENST00000488386 SERPINB6P35237 376 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 MARCKSL1P49006 195 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 RENBPP51606 427 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 PDX1P52945 283 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 MAZP56270 477 aaKnown RBP5.88□□□□□ -1.47
CDHR3-213ENST00000488386 AP1S1P61966 158 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 YPEL5P62699 121 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 NSUN2Q08J23 767 aaKnown RBP eCLIP5.88□□□□□ -1.47
CDHR3-213ENST00000488386 GALNT2Q10471 571 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 ZBTB17Q13105 803 aa5.88□□□□□ -1.47
CDHR3-213ENST00000488386 ILKQ13418 452 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms