RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 SPARCL1Q14515 664 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 CACHD1Q5VU97 1274 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 IRGCQ6NXR0 463 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 FAM92BQ6ZTR7 304 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 PEX26Q7Z412 305 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 KLHL6Q8WZ60 621 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 ZDHHC12Q96GR4 267 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 OR6C1Q96RD1 312 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 ARNT2Q9HBZ2 717 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 AMFRQ9UKV5 643 aa18.92■□□□□ 0.62
CD55-209ENST00000488171 PACSIN2Q9UNF0 486 aaPredicted RBP18.92■□□□□ 0.62
CD55-209ENST00000488171 MGAT4DA6NG13 374 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 ZNF891A8MT65 544 aaPredicted RBP18.91■□□□□ 0.62
CD55-209ENST00000488171 DDX3YO15523 660 aaKnown RBP18.91■□□□□ 0.62
CD55-209ENST00000488171 CRTAMO95727 393 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 MTHFD1P11586 935 aaKnown RBP18.91■□□□□ 0.62
CD55-209ENST00000488171 MAP7Q14244 749 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 BCL7AQ4VC05 210 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 KCTD11Q693B1 232 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 OR2L2Q8NH16 312 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 RNF31Q96EP0 1072 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 PPP1R2P1Q96PQ5 205 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 INSM2Q96T92 566 aaPredicted RBP18.91■□□□□ 0.62
CD55-209ENST00000488171 C19orf43Q9BQ61 176 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 TRIT1Q9H3H1 467 aaKnown RBP18.91■□□□□ 0.62
CD55-209ENST00000488171 SEMA5BQ9P283 1151 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 IL17BQ9UHF5 180 aa18.91■□□□□ 0.62
CD55-209ENST00000488171 CFAP20Q9Y6A4 193 aaKnown RBP18.91■□□□□ 0.62
CD55-209ENST00000488171 BOD1L1Q8NFC6 3051 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 NKX2-8O15522 239 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 LDB2O43679 373 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 ABCB7O75027 752 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 STAT5AP42229 794 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 TMPRSS15P98073 1019 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 PDE1BQ01064 536 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 KLF1Q13351 362 aaPredicted RBP18.9■□□□□ 0.62
CD55-209ENST00000488171 IL11RAQ14626 422 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 BORAQ6PGQ7 559 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 KIAA1143Q96AT1 154 aaPredicted RBP18.9■□□□□ 0.62
CD55-209ENST00000488171 LINC00615Q96LM1 132 aaPredicted RBP18.9■□□□□ 0.62
CD55-209ENST00000488171 DESI2Q9BSY9 194 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 ULBP3Q9BZM4 244 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 WWP1Q9H0M0 922 aa18.9■□□□□ 0.62
CD55-209ENST00000488171 IMP3Q9NV31 184 aaKnown RBP18.9■□□□□ 0.62
CD55-209ENST00000488171 GEMIN8Q9NWZ8 242 aaKnown RBP18.9■□□□□ 0.62
CD55-209ENST00000488171 FEZ2Q9UHY8 353 aaPredicted RBP18.9■□□□□ 0.62
CD55-209ENST00000488171 IGHV5-51A0A0C4DH38 117 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 MIF4GDA9UHW6 222 aaKnown RBP18.89■□□□□ 0.61
CD55-209ENST00000488171 CCL22O00626 93 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 ZNF189O75820 626 aaPredicted RBP18.89■□□□□ 0.61
CD55-209ENST00000488171 METTL18O95568 372 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 FTCDO95954 541 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 SFTPCP11686 197 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 NELFEP18615 380 aaKnown RBP18.89■□□□□ 0.61
CD55-209ENST00000488171 PARP6Q2NL67 630 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 DUS1LQ6P1R4 473 aaKnown RBP18.89■□□□□ 0.61
CD55-209ENST00000488171 MICALCLQ6ZW33 695 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 SYCE1Q8N0S2 351 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 NXPE1Q8N323 547 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 ESX1Q8N693 406 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 LILRA3Q8N6C8 439 aaPredicted RBP18.89■□□□□ 0.61
CD55-209ENST00000488171 UBL4BQ8N7F7 174 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 FAM71DQ8N9W8 422 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 TTC13Q8NBP0 860 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 SPDYE1Q8NFV5 336 aaPredicted RBP18.89■□□□□ 0.61
CD55-209ENST00000488171 FAM96AQ9H5X1 160 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 FAM8A1Q9UBU6 413 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 CRLS1Q9UJA2 301 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 ACSL5Q9ULC5 683 aa18.89■□□□□ 0.61
CD55-209ENST00000488171 R3HDM2Q9Y2K5 976 aaKnown RBP18.89■□□□□ 0.61
CD55-209ENST00000488171 TCRBV7S2A1N4TA0A589 114 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 KLHL33A6NCF5 533 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 GOLGA6L9A6NEM1 432 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 SLC28A2O43868 658 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 FGF5P12034 268 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 HADHAP40939 763 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 PRLHRP49683 370 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 GDF10P55107 478 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 KIF5AQ12840 1032 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 PLCL1Q15111 1095 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 ARHGEF18Q6ZSZ5 1173 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 SNX20Q7Z614 316 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 SLC35B2Q8TB61 432 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 ULK4Q96C45 1275 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 ELMO2Q96JJ3 720 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 SLC41A2Q96JW4 573 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 C12orf66Q96MD2 445 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 EFHD1Q9BUP0 239 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 RPS6KL1Q9Y6S9 549 aa18.88■□□□□ 0.61
CD55-209ENST00000488171 GOLGA6L3A6NEY3 463 aa18.87■□□□□ 0.61
CD55-209ENST00000488171 PYCARD-AS1I3L0S3 204 aa18.87■□□□□ 0.61
CD55-209ENST00000488171 PRKAR1AP10644 381 aa18.87■□□□□ 0.61
CD55-209ENST00000488171 ITGALP20701 1170 aa18.87■□□□□ 0.61
CD55-209ENST00000488171 F8A1P23610 371 aa18.87■□□□□ 0.61
CD55-209ENST00000488171 CDKN1CP49918 316 aaPredicted RBP18.87■□□□□ 0.61
CD55-209ENST00000488171 NFKB2Q00653 900 aa18.87■□□□□ 0.61
CD55-209ENST00000488171 CDC20Q12834 499 aa18.87■□□□□ 0.61
CD55-209ENST00000488171 CAPRIN2Q6IMN6 1127 aaKnown RBP18.87■□□□□ 0.61
CD55-209ENST00000488171 KLHL35Q6PF15 583 aa18.87■□□□□ 0.61
CD55-209ENST00000488171 C6orf15Q6UXA7 325 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms