RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 HPSEQ9Y251 543 aa15.18■□□□□ 0.02
PKD1-220ENST00000487932 ZSCAN5BA6NJL1 495 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 EIF1AYO14602 144 aaKnown RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 KRT36O76013 467 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 PKMP14618 531 aaKnown RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 IGFBP5P24593 272 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 GRK5P34947 590 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 KIR3DL1P43629 444 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 AP2S1P53680 142 aaPredicted RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 NAA20P61599 178 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 PARP15Q460N3 678 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 RBM44Q6ZP01 1051 aaKnown RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 LRRC70Q7Z2Q7 622 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 IL31RAQ8NI17 732 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 ZNF570Q96NI8 536 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 GDF3Q9NR23 364 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 ABCB8Q9NUT2 735 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 C2orf71A6NGG8 1288 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 TMEM150CB9EJG8 249 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 FAM155BO75949 473 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 NADKO95544 446 aaPredicted RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 C1QTNF8P60827 252 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 PRR5P85299 388 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 FUT10Q6P4F1 479 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 TMEM161BQ8NDZ6 487 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 HMCESQ96FZ2 354 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 B3GALT6Q96L58 329 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 GFM1Q96RP9 751 aaKnown RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 HEPHQ9BQS7 1158 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.17■□□□□ 0.02
PKD1-220ENST00000487932 C2CD2Q9Y426 696 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 PCDHB1Q9Y5F3 818 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 UGT2B11O75310 529 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 ACVR2AP27037 513 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 GAD2Q05329 585 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 SLC25A52Q3SY17 297 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 PPTC7Q8NI37 304 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 GTF2IRD1Q9UHL9 959 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 PFDN2Q9UHV9 154 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 RWDD3Q9Y3V2 267 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 FKBP7Q9Y680 259 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 DHFRP00374 187 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 GDI1P31150 447 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 TAS2R40P59535 323 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 DNASE1L3Q13609 305 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 DIRAS2Q96HU8 199 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 CAPNS2Q96L46 248 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 CYP2S1Q96SQ9 504 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 WDR55Q9H6Y2 383 aaPredicted RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 TESMINQ9Y4I5 508 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 PMF1-BGLAPU3KQ54 211 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 FADS2P1A8MWK0 482 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 hCG_2039718K7EN88 272 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 SMAD9O15198 467 aaKnown RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 HDAC3O15379 428 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 RENP00797 406 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 ITGAVP06756 1048 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 SDC2P34741 201 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 MAN2A2P49641 1150 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 FOLH1Q04609 750 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 RFTN2Q52LD8 501 aaPredicted RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 GLYATQ6IB77 296 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 PIWIL4Q7Z3Z4 852 aaKnown RBP15.17■□□□□ 0.02
PKD1-220ENST00000487932 DENND6BQ8NEG7 585 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 PHF12Q96QT6 1004 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 OR2AG1Q9H205 316 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 IFT52Q9Y366 437 aa15.17■□□□□ 0.02
PKD1-220ENST00000487932 GRIN2DO15399 1336 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 TSPAN1O60635 241 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 DRG2P55039 364 aaKnown RBP15.16■□□□□ 0.02
PKD1-220ENST00000487932 SPATA19Q7Z5L4 167 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 SERPINA9Q86WD7 417 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 ECHDC2Q86YB7 292 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 KCTD15Q96SI1 283 aaPredicted RBP15.16■□□□□ 0.02
PKD1-220ENST00000487932 MGME1Q9BQP7 344 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 TBL1XR1Q9BZK7 514 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 C8orf4Q9NR00 106 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 MIOSQ9NXC5 875 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 hCG_1818297A0A087WSY0 165 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 PCP4L1A6NKN8 68 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 DHX15O43143 795 aaKnown RBP15.16■□□□□ 0.02
PKD1-220ENST00000487932 MARCKSL1P49006 195 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 LDLRAP1Q5SW96 308 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 QSOX2Q6ZRP7 698 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 SYVN1Q86TM6 617 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 CEP97Q8IW35 865 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 JOSD2Q8TAC2 188 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 TWIST2Q8WVJ9 160 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 CCDC120Q96HB5 630 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.16■□□□□ 0.024e-7■■■■■ 40.2
PKD1-220ENST00000487932 CACNG4Q9UBN1 327 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 FAM240BA0A1B0GVZ2 78 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 EME2A4GXA9 379 aaPredicted RBP15.16■□□□□ 0.02
PKD1-220ENST00000487932 C5orf51A6NDU8 294 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 VPS26BQ4G0F5 336 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 HPS1Q92902 700 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 NXNL1Q96CM4 212 aa15.16■□□□□ 0.02
PKD1-220ENST00000487932 CARS2Q9HA77 564 aaKnown RBP15.16■□□□□ 0.02
PKD1-220ENST00000487932 TRPV5Q9NQA5 729 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms