RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 TMEM175Q9BSA9 504 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 MAT2BQ9NZL9 334 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 SLC17A6Q9P2U8 582 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 MT-ND1P03886 318 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 ALPIP09923 528 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 ACTR1BP42025 376 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 ACTR1AP61163 376 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 SAPCD2Q86UD0 394 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 ZNF280BQ86YH2 543 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 MMAAQ8IVH4 418 aaKnown RBP13.2□□□□□ -0.3
HDLBP-241ENST00000487169 CNTD1Q8N815 330 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-241ENST00000487169 MTERF1Q99551 399 aaKnown RBP13.2□□□□□ -0.3
HDLBP-241ENST00000487169 KLHL25Q9H0H3 589 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 ZDHHC18Q9NUE0 388 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 SAMD4AQ9UPU9 718 aaKnown RBP13.2□□□□□ -0.3
HDLBP-241ENST00000487169 SCML2Q9UQR0 700 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 AP4B1Q9Y6B7 739 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 A8MUI8 341 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 MTX2O75431 263 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 TM7SF2O76062 418 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 LAMP2P13473 410 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 CMPK1P30085 196 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 CCR3P51677 355 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 ATP12AP54707 1039 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 LSM3P62310 102 aaKnown RBP13.2□□□□□ -0.3
HDLBP-241ENST00000487169 TAF13Q15543 124 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 DGUOKQ16854 277 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 TRIM71Q2Q1W2 868 aaKnown RBP13.2□□□□□ -0.3
HDLBP-241ENST00000487169 BROXQ5VW32 411 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 SNX20Q7Z614 316 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 TRIB2Q92519 343 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 Q96MT0 163 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 MCCC1Q96RQ3 725 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-241ENST00000487169 CIB1Q99828 191 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 POLMQ9NP87 494 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-241ENST00000487169 PPIEQ9UNP9 301 aaKnown RBP13.2□□□□□ -0.3
HDLBP-241ENST00000487169 WNT6Q9Y6F9 365 aa13.2□□□□□ -0.3
HDLBP-241ENST00000487169 LAMA4Q16363 1823 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-241ENST00000487169 PIP5K1BO14986 540 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 SLC35G6P0C7Q6 338 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 ALOX12P18054 663 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 PLA2G16P53816 162 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 ARSIQ5FYB1 569 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 LYSMD3Q7Z3D4 306 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-241ENST00000487169 SPPL2CQ8IUH8 684 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 VANGL1Q8TAA9 524 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-241ENST00000487169 EXO5Q9H790 373 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 CITO14578 2027 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 C8GP07360 202 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 NT5EP21589 574 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 TOP3AQ13472 1001 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-241ENST00000487169 MTX3Q5HYI7 312 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 GDPD4Q6W3E5 623 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 PROSER1Q86XN7 944 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 HIPK1Q86Z02 1210 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 CACTIN-AS1Q8N1I8 211 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 OR7A2PQ8NGA2 310 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 C12orf66Q96MD2 445 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 ANKRD12Q6UB98 2062 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 A0A1B0GW55 424 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 ELOVL7A1L3X0 281 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 FGF18O76093 207 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 DUX4L2P0CJ85 424 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 DUX4L3P0CJ86 424 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 DUX4L4P0CJ87 422 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 DUX4L5P0CJ88 424 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 DUX4L6P0CJ89 424 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 DUX4L7P0CJ90 424 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 NELFEP18615 380 aaKnown RBP13.19□□□□□ -0.3
HDLBP-241ENST00000487169 EFNA1P20827 205 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-241ENST00000487169 ALG11Q2TAA5 492 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 ZNF57Q68EA5 555 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-241ENST00000487169 SERINC5Q86VE9 423 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 CLDN19Q8N6F1 224 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 C11orf65Q8NCR3 313 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 OSER1Q9NX31 292 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 DUX4Q9UBX2 424 aa13.19□□□□□ -0.3
HDLBP-241ENST00000487169 MRPS7Q9Y2R9 242 aaKnown RBP13.19□□□□□ -0.3
HDLBP-241ENST00000487169 PIRO00625 290 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 CLDN4O14493 209 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 FPGTO14772 594 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 CYP4B1P13584 511 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 WDR4P57081 412 aaKnown RBP13.18□□□□□ -0.3
HDLBP-241ENST00000487169 LIPEQ05469 1076 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 CYP4F3Q08477 520 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 BNIP1Q12981 228 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 ZBTB6Q15916 424 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 KLHL12Q53G59 568 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 LDLRAP1Q5SW96 308 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 TAS1R3Q7RTX0 852 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 AMER2Q8N7J2 671 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 CYB5D2Q8WUJ1 264 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 SLCO2A1Q92959 643 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 SIPA1Q96FS4 1042 aa13.18□□□□□ -0.3
HDLBP-241ENST00000487169 OSBPL11Q9BXB4 747 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms