RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 HNMTP50135 292 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 IL18Q14116 193 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 ZFP69Q49AA0 526 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 TCEAL5Q5H9L2 206 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 ZNF730Q6ZMV8 503 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 OR52J3Q8NH60 311 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 ASB9Q96DX5 294 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 HBEGFQ99075 208 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 TFB2MQ9H5Q4 396 aaKnown RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 EBF2Q9HAK2 575 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 SLC35C2Q9NQQ7 365 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 MCUBQ9NWR8 336 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 TRIM17Q9Y577 477 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 FAM234BA2RU67 622 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 TGFBR2P37173 567 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 GPX6P59796 221 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 MYBPC1Q00872 1141 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 PLEKHG4Q58EX7 1191 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 CIR1Q86X95 450 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 SKA1Q96BD8 255 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 DNAJB9Q9UBS3 223 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 NKX1-2Q9UD57 310 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 ARL5CA6NH57 179 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 AQP12BA6NM10 295 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 AREL1O15033 823 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 IGFBP4P22692 258 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 UGT1A5P35504 534 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 PPM1AP35813 382 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 FAM110CQ1W6H9 321 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 DCST1Q5T197 706 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 TXNRD3NBQ6F5E7 133 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 KIAA1324Q6UXG2 1013 aaKnown RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 AQP12AQ8IXF9 295 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 NTAN1Q96AB6 310 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 KLHL32Q96NJ5 620 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 PCDHAC1Q9H158 963 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 MAGEB17A8MXT2 336 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 WWP2O00308 870 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 IMPDH1P20839 514 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 ZNF132P52740 706 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 HERVK_113P63132 956 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 MED27Q6P2C8 311 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 ZDHHC21Q8IVQ6 265 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 NSMCE3Q96MG7 304 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 CHCHD6Q9BRQ6 235 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 TTLL2Q9BWV7 592 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 ERVK-6Q9BXR3 956 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 C1orf109Q9NX04 203 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 FAM240BA0A1B0GVZ2 78 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 PSIP1O75475 530 aaKnown RBP16.24■□□□□ 0.19
COL7A1-210ENST00000487017 TYSND1Q2T9J0 566 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 ANKRD46Q86W74 232 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 KLHL23Q8NBE8 558 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 ADAMTS15Q8TE58 950 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 DIRAS2Q96HU8 199 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 PEX16Q9Y5Y5 336 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
COL7A1-210ENST00000487017 hCG_2039718K7EN88 272 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 C22orf31O95567 290 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 CFHP08603 1231 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 SRSF11Q05519 484 aaKnown RBP16.24■□□□□ 0.19
COL7A1-210ENST00000487017 CHIT1Q13231 466 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 LAPTM5Q13571 262 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 XAGE5Q8WWM1 108 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 AKAP7Q9P0M2 348 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-210ENST00000487017 NR2E3Q9Y5X4 410 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 GSAPA4D1B5 854 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 IQCF5A8MTL0 148 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 SLC25A12O75746 678 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 GRIA1P42261 906 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 CCR10P46092 362 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 MTPNP58546 118 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 AP1S1P61966 158 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 MERTKQ12866 999 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 PLA2G4EQ3MJ16 856 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 PARGQ86W56 976 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 FIBCD1Q8N539 461 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 TUBGCP5Q96RT8 1024 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 MIR1-1HGQ9H1L0 117 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 DUOX1Q9NRD9 1551 aa16.24■□□□□ 0.19
COL7A1-210ENST00000487017 MTRF1O75570 445 aaKnown RBP16.23■□□□□ 0.19
COL7A1-210ENST00000487017 HTR1BP28222 390 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 FAM174BQ3ZCQ3 159 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 TMEM198Q66K66 360 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 OR5K1Q8NHB7 308 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 FBXL18Q96ME1 805 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 FCRL4Q96PJ5 515 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 CD320Q9NPF0 282 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 FAM53CQ9NYF3 392 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 GTF2IRD1Q9UHL9 959 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 IRAK3Q9Y616 596 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 IFT172Q9UG01 1749 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 ARHGEF33A8MVX0 844 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 ALG11Q2TAA5 492 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 MYOCQ99972 504 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 FEM1AQ9BSK4 669 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 MATN2O00339 956 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 TSPAN9O75954 239 aa16.23■□□□□ 0.19
COL7A1-210ENST00000487017 CDK14O94921 469 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms