RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 ADARP55265 1226 aaKnown RBP12.9□□□□□ -0.34
SF1-216ENST00000486867 SPIDRQ14159 915 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 IGF2-ASQ6U949 168 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 TMEM26Q6ZUK4 368 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 MAATS1Q7Z4T9 603 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 SLITRK4Q8IW52 837 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 KDF1Q8NAX2 398 aaPredicted RBP12.9□□□□□ -0.34
SF1-216ENST00000486867 ZFPM2Q8WW38 1151 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 LRRC39Q96DD0 335 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 LIN37Q96GY3 246 aaPredicted RBP12.9□□□□□ -0.34
SF1-216ENST00000486867 SNF8Q96H20 258 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 GFM1Q96RP9 751 aaKnown RBP12.9□□□□□ -0.34
SF1-216ENST00000486867 TCF12Q99081 682 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 DPYSL5Q9BPU6 564 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 NAT9Q9BTE0 207 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.9□□□□□ -0.34
SF1-216ENST00000486867 P2RY12Q9H244 342 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 OR52A5Q9H2C5 316 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 COG4Q9H9E3 785 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 VPS37BQ9H9H4 285 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 SLC40A1Q9NP59 571 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 SAMD15Q9P1V8 674 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 PRSS21Q9Y6M0 314 aa12.9□□□□□ -0.34
SF1-216ENST00000486867 KMT2BQ9UMN6 2715 aaPredicted RBP12.9□□□□□ -0.34
SF1-216ENST00000486867 AHCTF1Q8WYP5 2266 aa12.9□□□□□ -0.35
SF1-216ENST00000486867 URB1O60287 2271 aaKnown RBP12.89□□□□□ -0.35
SF1-216ENST00000486867 PDZK1P1A8MUH7 402 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 E7ESA3 106 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 TMX2-CTNND1H3BSU7 103 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 NDC80O14777 642 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 LIN7AO14910 233 aaPredicted RBP12.89□□□□□ -0.35
SF1-216ENST00000486867 OR1I1O60431 355 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 SNX2O60749 519 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 DXOO77932 396 aaKnown RBP12.89□□□□□ -0.35
SF1-216ENST00000486867 VAPBO95292 243 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 CPNE6O95741 557 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 PAMP19021 973 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 RPL10P27635 214 aaKnown RBP12.89□□□□□ -0.35
SF1-216ENST00000486867 CSF2RBP32927 897 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
SF1-216ENST00000486867 CD151P48509 253 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 OR1D5P58170 312 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 CFHR1Q03591 330 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 TUBB2AQ13885 445 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 RPE65Q16518 533 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 WHAMMP3Q1A5X7 153 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 MSS51Q4VC12 460 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 DUPD1Q68J44 220 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 WDR74Q6RFH5 385 aaPredicted RBP12.89□□□□□ -0.35
SF1-216ENST00000486867 CES3Q6UWW8 571 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 UNQ6494/PRO21346Q6UXR6 183 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 TMPRSS9Q7Z410 1059 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 LRRC6Q86X45 466 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 MARCH9Q86YJ5 346 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 LMNTD2Q8IXW0 634 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 LILRA3Q8N6C8 439 aaPredicted RBP12.89□□□□□ -0.35
SF1-216ENST00000486867 NAT14Q8WUY8 206 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 RMDN2Q96LZ7 410 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 TRIM56Q9BRZ2 755 aaKnown RBP12.89□□□□□ -0.35
SF1-216ENST00000486867 ERP44Q9BS26 406 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 TUBB2BQ9BVA1 445 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 CARD6Q9BX69 1037 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 STN1Q9H668 368 aaKnown RBP12.89□□□□□ -0.35
SF1-216ENST00000486867 PLAC1Q9HBJ0 212 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 FAM169AQ9Y6X4 670 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 ZZEF1O43149 2961 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 ANKRD12Q6UB98 2062 aa12.89□□□□□ -0.35
SF1-216ENST00000486867 A0A1W2PNU3 283 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 SLC5A10A0PJK1 596 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 TRABD2BA6NFA1 517 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 OR52A4PA6NMU1 304 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 EFCAB8A8MWE9 144 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 BHMG1C9JSJ3 638 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 F8W8V4 182 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 PRMT5O14744 637 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 RAD51CO43502 376 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 TTC4O95801 387 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 FTH1P02794 183 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 PROS1P07225 676 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 OR56A5P0C7T3 313 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 MTHFD1P11586 935 aaKnown RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 HALP42357 657 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 ITGA8P53708 1063 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 TERF1P54274 439 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 DRG2P55039 364 aaKnown RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 PLOD1Q02809 727 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 CKAP4Q07065 602 aaKnown RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 C2orf54Q08AI8 447 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 FRG1Q14331 258 aaKnown RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 RNF187Q5TA31 235 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 STEAP4Q687X5 459 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 MRNIPQ6NTE8 343 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 NEPROQ6NW34 567 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 ZNF574Q6ZN55 896 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 CENPUQ71F23 418 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 B3GNT8Q7Z7M8 397 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 CILP2Q8IUL8 1156 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 Q8N9G6 341 aaPredicted RBP12.88□□□□□ -0.35
SF1-216ENST00000486867 OR4D9Q8NGE8 314 aa12.88□□□□□ -0.35
SF1-216ENST00000486867 LPGAT1Q92604 370 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms