RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ARL8AQ96BM9 186 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 FAM149B1Q96BN6 582 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 MISP3Q96FF7 219 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 EEF2KMTQ96G04 330 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 PAGE5Q96GU1 130 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 LIN37Q96GY3 246 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-209ENST00000486618 INTS4Q96HW7 963 aaKnown RBP6.79□□□□□ -1.32
HDAC3-209ENST00000486618 PPP1R16AQ96I34 528 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 FEM1CQ96JP0 617 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 NOX5Q96PH1 765 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 STRADBQ9C0K7 418 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 MIS12Q9H081 205 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 C1orf21Q9H246 121 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 FZD3Q9NPG1 666 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 GPRC5BQ9NZH0 403 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 SPASTQ9UBP0 616 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 MALT1Q9UDY8 824 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 ACSL6Q9UKU0 697 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 RP1L1Q8IWN7 2480 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-209ENST00000486618 FLNCQ14315 2725 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 MYO9AB2RTY4 2548 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 KCNU1A8MYU2 1149 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 K7EPI3 171 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 M0QYV0 167 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 BIN1O00499 593 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 NEMP1O14524 444 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 FPGTO14772 594 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 MT-CO1P00395 513 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 CSTBP04080 98 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 CEACAM5P06731 702 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 ANXA6P08133 673 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 SNRNP70P08621 437 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 LIPCP11150 499 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 EPB41P11171 864 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 PCNAP12004 261 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 JAK1P23458 1154 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 UGT1A5P35504 534 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 ACADSBP45954 432 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 RPS21P63220 83 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 MRPS15P82914 257 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 DR1Q01658 176 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 TLE1Q04724 770 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 DMPKQ09013 629 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 SNX1Q13596 522 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 AUHQ13825 339 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 PTK2BQ14289 1009 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 FZD2Q14332 565 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 NFE2L1Q14494 772 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 PCBP2Q15366 365 aaKnown RBP eCLIP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 DEFB133Q30KQ1 61 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 MANEAQ5SRI9 462 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 ZBTB37Q5TC79 503 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 TCERG1LQ5VWI1 586 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 OR6B2Q6IFH4 312 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 KIAA1161Q6NSJ0 714 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 ESRP1Q6NXG1 681 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 ARHGAP11AQ6P4F7 1023 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 TMEM270Q6UE05 265 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 KYAT3Q6YP21 454 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 ERN2Q76MJ5 926 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 CEP97Q8IW35 865 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 GUF1Q8N442 669 aaKnown RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 SH2D3CQ8N5H7 860 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 FAM156AQ8NDB6 213 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 CLEC4CQ8WTT0 213 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 KISS1RQ969F8 398 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-209ENST00000486618 ART5Q96L15 291 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 ATP6V1G3Q96LB4 118 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 BMFQ96LC9 184 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 TAAR9Q96RI9 348 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 FEM1AQ9BSK4 669 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 TBCDQ9BTW9 1192 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 HGH1Q9BTY7 390 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 BOCQ9BWV1 1114 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 TMEM120AQ9BXJ8 343 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 HDAC8Q9BY41 377 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 SLC17A9Q9BYT1 436 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 SLC25A18Q9H1K4 315 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 SYNDIG1Q9H7V2 258 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 FANCEQ9HB96 536 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 EPB41L5Q9HCM4 733 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 GPR27Q9NS67 375 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 PCDHA7Q9UN72 937 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 NAALADL1Q9UQQ1 740 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 COQ4Q9Y3A0 265 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 UNC79Q9P2D8 2635 aa6.78□□□□□ -1.32
HDAC3-209ENST00000486618 USP9YO00507 2555 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 COL27A1Q8IZC6 1860 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 PMS2P1A4D2B8 440 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 POM121BA6NF01 834 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 C16orf96A6NNT2 1141 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 B2RBV5 119 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 M0QYT0 321 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 FANCGO15287 622 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 NVLO15381 856 aaKnown RBP6.77□□□□□ -1.33
HDAC3-209ENST00000486618 MAGEB3O15480 346 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 FMO6PO60774 539 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 SMPD2O60906 423 aa6.77□□□□□ -1.33
HDAC3-209ENST00000486618 KCNJ13O60928 360 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms