RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 VPS37BQ9H9H4 285 aa15.21■□□□□ 0.03
RPUSD3-217ENST00000485705 INTS10Q9NVR2 710 aaKnown RBP15.21■□□□□ 0.03
RPUSD3-217ENST00000485705 PSAT1Q9Y617 370 aa15.21■□□□□ 0.03
RPUSD3-217ENST00000485705 U3KQA8 63 aa15.21■□□□□ 0.03
RPUSD3-217ENST00000485705 KNTC1P50748 2209 aa15.21■□□□□ 0.03
RPUSD3-217ENST00000485705 ANKRD12Q6UB98 2062 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 A6NCN8 305 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 NIPSNAP2O75323 286 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 LDOC1O95751 146 aaPredicted RBP15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 AHSGP02765 367 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 GSTA2P09210 222 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 OR56A5P0C7T3 313 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 RPL10P27635 214 aaKnown RBP15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 MAZP56270 477 aaKnown RBP15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 DNAJC3Q13217 504 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 NAA30Q147X3 362 aaPredicted RBP15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 PTRHD1Q6GMV3 140 aaKnown RBP15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 ZCCHC8Q6NZY4 707 aaKnown RBP15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 ZNF549Q6P9A3 640 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 OGFOD3Q6PK18 319 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 CFAP206Q8IYR0 622 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 NAGSQ8N159 534 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 GPR156Q8NFN8 814 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 FBF1Q8TES7 1133 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 SCG3Q8WXD2 468 aaKnown RBP15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 UBXN4Q92575 508 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 FAM136AQ96C01 138 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 CNDP2Q96KP4 475 aaKnown RBP15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 SCHIP1Q9P0W5 487 aaPredicted RBP15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 GALPQ9UBC7 116 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 WDR37Q9Y2I8 494 aa15.2■□□□□ 0.02
RPUSD3-217ENST00000485705 C17orf113A0A1B0GUU1 675 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 DCDC2BA2VCK2 349 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 FAM159BA6NKW6 160 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 QSOX1O00391 747 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 GIPC1O14908 333 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 PFDN6O15212 129 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 KCNJ13O60928 360 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 TRIM16O95361 564 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 PKMP14618 531 aaKnown RBP15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 BRAFP15056 766 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 VCLP18206 1134 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 TNFRSF8P28908 595 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 CCR7P32248 378 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 LEPRP48357 1165 aaKnown RBP15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 CSE1LP55060 971 aaKnown RBP15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 VSNL1P62760 191 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 TUBB4BP68371 445 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 CLCA4Q14CN2 919 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 EFTUD2Q15029 972 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■□□□ 13.9
RPUSD3-217ENST00000485705 BRD3Q15059 726 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 METRNLQ641Q3 311 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 CCNI2Q6ZMN8 369 aaPredicted RBP15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 CEP128Q6ZU80 1094 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 LRRC6Q86X45 466 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 FAM181AQ8N9Y4 354 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 HM13Q8TCT9 377 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 ELMO1Q92556 727 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 TSPYL1Q9H0U9 437 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 COG4Q9H9E3 785 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 FTSJ1Q9UET6 329 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 GNPTGQ9UJJ9 305 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 PSMD13Q9UNM6 376 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 PCDHB1Q9Y5F3 818 aa15.19■□□□□ 0.02
RPUSD3-217ENST00000485705 PDZK1P1A8MUH7 402 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 ACSL3O95573 720 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 FTH1P02794 183 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 ESR1P03372 595 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 CSRP1P21291 193 aaKnown RBP15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 IDSP22304 550 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 PDHA2P29803 388 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 PREPP48147 710 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 ADARP55265 1226 aaKnown RBP15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 BOP1Q14137 746 aaKnown RBP15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 NR0B2Q15466 257 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 KBTBD12Q3ZCT8 623 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 RBM20Q5T481 1227 aaKnown RBP15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 GUSBP11Q6P575 273 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 IYDQ6PHW0 289 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 KIAA0408Q6ZU52 694 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 CYS1Q717R9 158 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 C17orf82Q86X59 251 aaPredicted RBP15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 ARL10Q8N8L6 244 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 EIF1ADQ8N9N8 165 aaKnown RBP15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 SLC37A2Q8TED4 501 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 NDNQ99608 321 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 RTKNQ9BST9 563 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 TXLNGYQ9BZA5 131 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 WWP1Q9H0M0 922 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 ZFATQ9P243 1243 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 VPS9D1Q9Y2B5 631 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 MED16Q9Y2X0 877 aa15.18■□□□□ 0.02
RPUSD3-217ENST00000485705 PRAMEF33A0A0G2JMD5 474 aa15.17■□□□□ 0.02
RPUSD3-217ENST00000485705 SPAARA0A1B0GVQ0 90 aa15.17■□□□□ 0.02
RPUSD3-217ENST00000485705 SLC5A10A0PJK1 596 aa15.17■□□□□ 0.02
RPUSD3-217ENST00000485705 OR52A4PA6NMU1 304 aa15.17■□□□□ 0.02
RPUSD3-217ENST00000485705 SPAG6O75602 509 aa15.17■□□□□ 0.02
RPUSD3-217ENST00000485705 F3P13726 295 aa15.17■□□□□ 0.02
RPUSD3-217ENST00000485705 CD151P48509 253 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms