RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 PDLIM2Q96JY6 352 aa17.53■□□□□ 0.4
RNF38-207ENST00000484621 TBC1D10AQ9BXI6 508 aa17.53■□□□□ 0.4
RNF38-207ENST00000484621 AP1M1Q9BXS5 423 aa17.53■□□□□ 0.4
RNF38-207ENST00000484621 CASS4Q9NQ75 786 aa17.53■□□□□ 0.4
RNF38-207ENST00000484621 ZDHHC3Q9NYG2 299 aa17.53■□□□□ 0.4
RNF38-207ENST00000484621 ZNF624Q9P2J8 865 aaPredicted RBP17.53■□□□□ 0.4
RNF38-207ENST00000484621 PSMD13Q9UNM6 376 aa17.53■□□□□ 0.4
RNF38-207ENST00000484621 WDR37Q9Y2I8 494 aa17.53■□□□□ 0.4
RNF38-207ENST00000484621 KLHL33A6NCF5 533 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 MGAT4DA6NG13 374 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 LILRA5A6NI73 299 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 PGRMC1O00264 195 aaKnown RBP17.52■□□□□ 0.4
RNF38-207ENST00000484621 PRSS56P0CW18 603 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 ATP1B2P14415 290 aaPredicted RBP17.52■□□□□ 0.4
RNF38-207ENST00000484621 ADRA1DP25100 572 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 ACRV1P26436 265 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 ARSDP51689 593 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 TRA2AQ13595 282 aaKnown RBP eCLIP17.52■□□□□ 0.4
RNF38-207ENST00000484621 CLCA4Q14CN2 919 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 TRIP13Q15645 432 aaPredicted RBP17.52■□□□□ 0.4
RNF38-207ENST00000484621 BCL7AQ4VC05 210 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 SNAP47Q5SQN1 464 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 FAM83HQ6ZRV2 1179 aaPredicted RBP17.52■□□□□ 0.4
RNF38-207ENST00000484621 TMEM26Q6ZUK4 368 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 SERPINA9Q86WD7 417 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 ZNF248Q8NDW4 579 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 CCDC97Q96F63 343 aaPredicted RBP17.52■□□□□ 0.4
RNF38-207ENST00000484621 OSBPL9Q96SU4 736 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 EIF2B3Q9NR50 452 aaKnown RBP17.52■□□□□ 0.4
RNF38-207ENST00000484621 POT1Q9NUX5 634 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 TMEM9Q9P0T7 183 aa17.52■□□□□ 0.4
RNF38-207ENST00000484621 TRBV5-4A0A0C4DH59 114 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 CDRT15L2A8MXV6 281 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 ERVH48-1M5A8F1 160 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 HGSO14964 777 aaPredicted RBP17.51■□□□□ 0.39
RNF38-207ENST00000484621 ITIH1P19827 911 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 VPS41P49754 854 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 SESN2P58004 480 aaPredicted RBP17.51■□□□□ 0.39
RNF38-207ENST00000484621 C16orf72Q14CZ0 275 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 KCTD19Q17RG1 926 aaPredicted RBP17.51■□□□□ 0.39
RNF38-207ENST00000484621 TSTD2Q5T7W7 516 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 ARHGAP40Q5TG30 622 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 PPHLN1Q8NEY8 458 aaKnown RBP17.51■□□□□ 0.39
RNF38-207ENST00000484621 OR2L2Q8NH16 312 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 COG1Q8WTW3 980 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.51■□□□□ 0.39
RNF38-207ENST00000484621 RANBP9Q96S59 729 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 EPB41L1Q9H4G0 881 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 UCK1Q9HA47 277 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 SMARCAL1Q9NZC9 954 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 SLC2A6Q9UGQ3 507 aa17.51■□□□□ 0.39
RNF38-207ENST00000484621 TTC7AQ9ULT0 858 aaPredicted RBP17.51■□□□□ 0.39
RNF38-207ENST00000484621 CCDC162PA2VCL2 907 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 OR51F1A6NGY5 319 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 A8MU76 341 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 SGTAO43765 313 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 THRAP10827 490 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 AMD1P17707 334 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 PSMA3P25788 255 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 SLC5A2P31639 672 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 CSTF2P33240 577 aaKnown RBP eCLIP17.5■□□□□ 0.39
RNF38-207ENST00000484621 PRLHRP49683 370 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 MAPK10P53779 464 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 TERF1P54274 439 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 PRAMEP78395 509 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 SRSF1Q07955 248 aaKnown RBP eCLIP17.5■□□□□ 0.39
RNF38-207ENST00000484621 RPE65Q16518 533 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 METRNLQ641Q3 311 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 WDR74Q6RFH5 385 aaPredicted RBP17.5■□□□□ 0.39
RNF38-207ENST00000484621 NLRP9Q7RTR0 991 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 CLEC14AQ86T13 490 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 RBM12BQ8IXT5 1001 aaKnown RBP17.5■□□□□ 0.39
RNF38-207ENST00000484621 PIANPQ8IYJ0 282 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 CFAP206Q8IYR0 622 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 OR13J1Q8NGT2 312 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 OR6P1Q8NGX9 317 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 KCNE4Q8WWG9 221 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 TTC9Q92623 222 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 HDAC10Q969S8 669 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 LINC00615Q96LM1 132 aaPredicted RBP17.5■□□□□ 0.39
RNF38-207ENST00000484621 WWP1Q9H0M0 922 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 VPS37BQ9H9H4 285 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 SLC40A1Q9NP59 571 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 ACSL5Q9ULC5 683 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 SNX12Q9UMY4 172 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 TCAF1Q9Y4C2 921 aa17.5■□□□□ 0.39
RNF38-207ENST00000484621 IGLV3-16A0A075B6K0 115 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 PRAMEF33A0A0G2JMD5 474 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 GOLGA6L10A0A0M3HER8 536 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 USP27XA6NNY8 438 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 AP3B1O00203 1094 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 UBXN7O94888 489 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 GOT2P00505 430 aaKnown RBP17.49■□□□□ 0.39
RNF38-207ENST00000484621 KRT14P02533 472 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 POLBP06746 335 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 SLC35G4P0C7Q5 338 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 TYRP1P17643 537 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 COILP38432 576 aaPredicted RBP17.49■□□□□ 0.39
RNF38-207ENST00000484621 ETV5P41161 510 aa17.49■□□□□ 0.39
RNF38-207ENST00000484621 CDK16Q00536 496 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms