RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CLN3Q13286 438 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 SQSTM1Q13501 440 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 TRA2AQ13595 282 aaKnown RBP eCLIP12.03□□□□□ -0.48
MSH5-216ENST00000484309 RPE65Q16518 533 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 DBN1Q16643 649 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 GPR33Q49SQ1 333 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 BCL7AQ4VC05 210 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 BROXQ5VW32 411 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 WDR74Q6RFH5 385 aaPredicted RBP12.03□□□□□ -0.48
MSH5-216ENST00000484309 XKR5Q6UX68 686 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 WASH2PQ6VEQ5 465 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 CFAP206Q8IYR0 622 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 PRELID2Q8N945 189 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 AGBL5Q8NDL9 886 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 SPDYE1Q8NFV5 336 aaPredicted RBP12.03□□□□□ -0.48
MSH5-216ENST00000484309 OR2L2Q8NH16 312 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 MAIP1Q8WWC4 291 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 ART4Q93070 314 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 ZNF514Q96K75 400 aaPredicted RBP12.03□□□□□ -0.48
MSH5-216ENST00000484309 RMDN2Q96LZ7 410 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 ZNF778Q96MU6 729 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 TGM7Q96PF1 710 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 INSM2Q96T92 566 aaPredicted RBP12.03□□□□□ -0.48
MSH5-216ENST00000484309 CTRCQ99895 268 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 DPYSL5Q9BPU6 564 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 PRORYQ9H606 182 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 SLC40A1Q9NP59 571 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 CASS4Q9NQ75 786 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 WASH6PQ9NQA3 447 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 TTC7AQ9ULT0 858 aaPredicted RBP12.03□□□□□ -0.48
MSH5-216ENST00000484309 DRG1Q9Y295 367 aaKnown RBP12.03□□□□□ -0.48
MSH5-216ENST00000484309 PCDHGA7Q9Y5G6 932 aa12.03□□□□□ -0.48
MSH5-216ENST00000484309 DNMT3AQ9Y6K1 912 aaPredicted RBP12.03□□□□□ -0.48
MSH5-216ENST00000484309 HEATR9A2RTY3 570 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 H7C0S8 307 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 NVLO15381 856 aaKnown RBP12.02□□□□□ -0.49
MSH5-216ENST00000484309 KCNJ13O60928 360 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 GAS8O95995 478 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 FOXN2P32314 431 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 LEPRP48357 1165 aaKnown RBP12.02□□□□□ -0.49
MSH5-216ENST00000484309 PRLHRP49683 370 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 SESN2P58004 480 aaPredicted RBP12.02□□□□□ -0.49
MSH5-216ENST00000484309 PPP1CAP62136 330 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 CRADDP78560 199 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 CACNG1Q06432 222 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 PLCL1Q15111 1095 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 TSTD2Q5T7W7 516 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 ARHGAP40Q5TG30 622 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 METRNLQ641Q3 311 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 IRGCQ6NXR0 463 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 DRICH1Q6PGQ1 229 aaPredicted RBP12.02□□□□□ -0.49
MSH5-216ENST00000484309 CLDN19Q8N6F1 224 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 OR13J1Q8NGT2 312 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 C12orf66Q96MD2 445 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 AP1M1Q9BXS5 423 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 DPH1Q9BZG8 443 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 UCK1Q9HA47 277 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 SLC39A1Q9NY26 324 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 ZKSCAN5Q9Y2L8 839 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 PRSS21Q9Y6M0 314 aa12.02□□□□□ -0.49
MSH5-216ENST00000484309 MN1Q10571 1320 aaPredicted RBP12.02□□□□□ -0.49
MSH5-216ENST00000484309 IGLV3-16A0A075B6K0 115 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 CAPN5O15484 640 aaPredicted RBP12.01□□□□□ -0.49
MSH5-216ENST00000484309 KIF1CO43896 1103 aaKnown RBP12.01□□□□□ -0.49
MSH5-216ENST00000484309 GOT2P00505 430 aaKnown RBP12.01□□□□□ -0.49
MSH5-216ENST00000484309 SLC35G4P0C7Q5 338 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 LIPCP11150 499 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 MTHFD1P11586 935 aaKnown RBP12.01□□□□□ -0.49
MSH5-216ENST00000484309 CAPZBP47756 277 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 PREPP48147 710 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 SEPHS1P49903 392 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 TMPRSS3P57727 454 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 GSE1Q14687 1217 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 SKIDA1Q1XH10 827 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 TMEM164Q5U3C3 297 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 ANKS6Q68DC2 871 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 TTC27Q6P3X3 843 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 FAM92BQ6ZTR7 304 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 ARHGAP22Q7Z5H3 698 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 VASH2Q86V25 355 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 PLXDC1Q8IUK5 500 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 PPHLN1Q8NEY8 458 aaKnown RBP12.01□□□□□ -0.49
MSH5-216ENST00000484309 OR6P1Q8NGX9 317 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 HM13Q8TCT9 377 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 HDAC10Q969S8 669 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 TAAR9Q96RI9 348 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 C19orf43Q9BQ61 176 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 EPB41L1Q9H4G0 881 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 COG4Q9H9E3 785 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 APMAPQ9HDC9 416 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 PDP2Q9P2J9 529 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 JRKLQ9Y4A0 524 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 TCAF1Q9Y4C2 921 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 B3GALT1Q9Y5Z6 326 aa12.01□□□□□ -0.49
MSH5-216ENST00000484309 TCRBV7S3A2A0A539 114 aa12□□□□□ -0.49
MSH5-216ENST00000484309 USP27XA6NNY8 438 aa12□□□□□ -0.49
MSH5-216ENST00000484309 ZSCAN12O43309 604 aa12□□□□□ -0.49
MSH5-216ENST00000484309 OR1I1O60431 355 aa12□□□□□ -0.49
MSH5-216ENST00000484309 RASSF9O75901 435 aa12□□□□□ -0.49
MSH5-216ENST00000484309 C9P02748 559 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms