RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 COL4A2P08572 1712 aa25.82■■□□□ 1.72
SHOX2-204ENST00000483851 LRRK1Q38SD2 2015 aa25.82■■□□□ 1.72
SHOX2-204ENST00000483851 LZTS3O60299 673 aaPredicted RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 S100BP04271 92 aaPredicted RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 MPC1LP0DKB6 136 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 EZRP15311 586 aaKnown RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 EEF1DP29692 281 aaKnown RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 NTSR1P30989 418 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 HK3P52790 923 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 LCP2Q13094 533 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 VWA5B1Q5TIE3 1220 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 NEK10Q6ZWH5 1172 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 EZH1Q92800 747 aaPredicted RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 MAELQ96JY0 434 aaKnown RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 GAS2L1Q99501 681 aaPredicted RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 ZCCHC2Q9C0B9 1178 aaKnown RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 CDYLQ9Y232 598 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 TRAF6Q9Y4K3 522 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 SIX3O95343 332 aaPredicted RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 MLYCDO95822 493 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 CLCQ05315 142 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 SMAD4Q13485 552 aaKnown RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 SLC9B1Q4ZJI4 515 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 TRMT11Q7Z4G4 463 aaKnown RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 CLYBLQ8N0X4 340 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 MMADHCQ9H3L0 296 aaPredicted RBP25.81■■□□□ 1.72
SHOX2-204ENST00000483851 MRGBPQ9NV56 204 aa25.81■■□□□ 1.72
SHOX2-204ENST00000483851 GRXCR2A6NFK2 248 aa25.8■■□□□ 1.72
SHOX2-204ENST00000483851 GYG2O15488 501 aa25.8■■□□□ 1.72
SHOX2-204ENST00000483851 AOC1P19801 751 aa25.8■■□□□ 1.72
SHOX2-204ENST00000483851 DRD1P21728 446 aa25.8■■□□□ 1.72
SHOX2-204ENST00000483851 DRD3P35462 400 aa25.8■■□□□ 1.72
SHOX2-204ENST00000483851 PCBP2Q15366 365 aaKnown RBP eCLIP25.8■■□□□ 1.72
SHOX2-204ENST00000483851 ZNF776Q68DI1 518 aaPredicted RBP25.8■■□□□ 1.72
SHOX2-204ENST00000483851 OR2T3Q8NH03 318 aa25.8■■□□□ 1.72
SHOX2-204ENST00000483851 ZNF483Q8TF39 744 aaPredicted RBP25.8■■□□□ 1.72
SHOX2-204ENST00000483851 SHCBP1LQ9BZQ2 653 aa25.8■■□□□ 1.72
SHOX2-204ENST00000483851 RNPEPL1Q9HAU8 725 aa25.8■■□□□ 1.72
SHOX2-204ENST00000483851 ZDHHC4Q9NPG8 344 aa25.8■■□□□ 1.72
SHOX2-204ENST00000483851 UBFD1O14562 309 aaKnown RBP25.79■■□□□ 1.72
SHOX2-204ENST00000483851 FFAR2O15552 330 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 SGTAO43765 313 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 MMP20O60882 483 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 ENO2P09104 434 aaPredicted RBP25.79■■□□□ 1.72
SHOX2-204ENST00000483851 RGS19P49795 217 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 INHBCP55103 352 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 STARD3Q14849 445 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 TMEM196Q5HYL7 178 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 ENDOVQ8N8Q3 282 aaKnown RBP25.79■■□□□ 1.72
SHOX2-204ENST00000483851 ASZ1Q8WWH4 475 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 NUF2Q9BZD4 464 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 NOP53Q9NZM5 478 aaKnown RBP25.79■■□□□ 1.72
SHOX2-204ENST00000483851 ANTXRLA6NF34 631 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 CDK14O94921 469 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 ANP32DO95626 131 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 C8GP07360 202 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 GLULP15104 373 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 VCLP18206 1134 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 TIE1P35590 1138 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 CCNG1P51959 295 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 TMEM115Q12893 351 aaPredicted RBP25.79■■□□□ 1.72
SHOX2-204ENST00000483851 AGERQ15109 404 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 TTC23LQ6PF05 361 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 HOMEZQ8IX15 550 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 TEX9Q8N6V9 391 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 NAT14Q8WUY8 206 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 MEAF6Q9HAF1 191 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 NKX1-2Q9UD57 310 aaPredicted RBP25.79■■□□□ 1.72
SHOX2-204ENST00000483851 TAGLN3Q9UI15 199 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 PCTPQ9UKL6 214 aa25.79■■□□□ 1.72
SHOX2-204ENST00000483851 REV3LO60673 3130 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 C2CD4DB7Z1M9 353 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 H3BQ06 376 aaPredicted RBP25.78■■□□□ 1.72
SHOX2-204ENST00000483851 SLC16A5O15375 505 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 SOD1P00441 154 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 PRLHRP49683 370 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 GTF2A1P52655 376 aaPredicted RBP25.78■■□□□ 1.72
SHOX2-204ENST00000483851 SP140Q13342 867 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 KHDC1Q4VXA5 237 aaKnown RBP25.78■■□□□ 1.72
SHOX2-204ENST00000483851 AGBL4Q5VU57 503 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 DET1Q7L5Y6 550 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 MSANTD3Q96H12 275 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 BRWD1Q9NSI6 2320 aa25.78■■□□□ 1.72
SHOX2-204ENST00000483851 CNOT6Q9ULM6 557 aaKnown RBP25.78■■□□□ 1.72
SHOX2-204ENST00000483851 PLK4O00444 970 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 SLC22A2O15244 555 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 MID1O15344 667 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 ATG13O75143 517 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 GSTM1P09488 218 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 ADSLP30566 484 aaPredicted RBP25.77■■□□□ 1.72
SHOX2-204ENST00000483851 WASP42768 502 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 GPR1P46091 355 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 CDH13P55290 713 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 SH3BP2P78314 561 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 CDKL1Q00532 357 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 GSTM4Q03013 218 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 SULT1C3Q6IMI6 304 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 TMPRSS6Q8IU80 811 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 SLC44A3Q8N4M1 653 aa25.77■■□□□ 1.72
SHOX2-204ENST00000483851 CHCHD4Q8N4Q1 142 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms