RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PRR5-ARHGAP8B1AHC4 643 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 E2F3O00716 465 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 PPP6CO00743 305 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 FFAR2O15552 330 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 SNX2O60749 519 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 MTX2O75431 263 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 ADH1BP00325 375 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 ADSLP30566 484 aaPredicted RBP13.81□□□□□ -0.2
CLK3-204ENST00000483723 WASP42768 502 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 TAS2R38P59533 333 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 ARHGAP8P85298 464 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 TMEM115Q12893 351 aaPredicted RBP13.81□□□□□ -0.2
CLK3-204ENST00000483723 UBAP2LQ14157 1087 aaKnown RBP13.81□□□□□ -0.2
CLK3-204ENST00000483723 AGERQ15109 404 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 GPR153Q6NV75 609 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 METTL2BQ6P1Q9 378 aaKnown RBP13.81□□□□□ -0.2
CLK3-204ENST00000483723 RALGPS2Q86X27 583 aaPredicted RBP13.81□□□□□ -0.2
CLK3-204ENST00000483723 PELI3Q8N2H9 469 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 AADATQ8N5Z0 425 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 RASGEF1AQ8N9B8 481 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 ACTRT2Q8TDY3 377 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 AGAP11Q8TF27 550 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 NUS1Q96E22 293 aa13.81□□□□□ -0.2
CLK3-204ENST00000483723 RANBP2P49792 3224 aaKnown RBP13.8□□□□□ -0.2
CLK3-204ENST00000483723 C2CD4DB7Z1M9 353 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 MID1O15344 667 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 SLC16A5O15375 505 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 TAPBPO15533 448 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 TSPAN6O43657 245 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 LZTS3O60299 673 aaPredicted RBP13.8□□□□□ -0.2
CLK3-204ENST00000483723 RNASEH1O60930 286 aaKnown RBP13.8□□□□□ -0.2
CLK3-204ENST00000483723 SLCO2B1O94956 709 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 MLYCDO95822 493 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 FTH1P02794 183 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 ESRRAP11474 423 aaPredicted RBP13.8□□□□□ -0.2
CLK3-204ENST00000483723 TSPAN8P19075 237 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 IGFBP4P22692 258 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 EPHA3P29320 983 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 NTSR1P30989 418 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 TIE1P35590 1138 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 RPS14P62263 151 aaKnown RBP13.8□□□□□ -0.2
CLK3-204ENST00000483723 KCNJ2P63252 427 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 CDKL1Q00532 357 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 PDCD2Q16342 344 aaPredicted RBP13.8□□□□□ -0.2
CLK3-204ENST00000483723 PHKG1Q16816 387 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 TMEM196Q5HYL7 178 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 AGBL4Q5VU57 503 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 SULT1C3Q6IMI6 304 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 CHSY3Q70JA7 882 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 DET1Q7L5Y6 550 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 SLC44A3Q8N4M1 653 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 OR2T3Q8NH03 318 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 CEP70Q8NHQ1 597 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 TRPC4APQ8TEL6 797 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 SLC12A9Q9BXP2 914 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 C8orf33Q9H7E9 229 aaPredicted RBP13.8□□□□□ -0.2
CLK3-204ENST00000483723 MID1IP1Q9NPA3 183 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 TAGLN3Q9UI15 199 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 ASB1Q9Y576 335 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 ANKRD12Q6UB98 2062 aa13.8□□□□□ -0.2
CLK3-204ENST00000483723 GOLGA8QA0A0J9YX86 632 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 GOLGA8OA6NCC3 632 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 NCF1BA6NI72 391 aaPredicted RBP13.79□□□□□ -0.2
CLK3-204ENST00000483723 NCF1CA8MVU1 366 aaPredicted RBP13.79□□□□□ -0.2
CLK3-204ENST00000483723 GOLGA8NF8WBI6 632 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 GFYI3L273 518 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 AZIN1O14977 448 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 SLC22A2O15244 555 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 RASSF9O75901 435 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 C8GP07360 202 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 ENO2P09104 434 aaPredicted RBP13.79□□□□□ -0.2
CLK3-204ENST00000483723 NCF1P14598 390 aaPredicted RBP13.79□□□□□ -0.2
CLK3-204ENST00000483723 PRDX6P30041 224 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 PRLHRP49683 370 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 COPAP53621 1224 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 CTSCP53634 463 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 ZNF658BQ4V348 819 aaPredicted RBP13.79□□□□□ -0.2
CLK3-204ENST00000483723 ZNF648Q5T619 568 aaPredicted RBP13.79□□□□□ -0.2
CLK3-204ENST00000483723 KANK2Q63ZY3 851 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 TTC23LQ6PF05 361 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 FRA10AC1Q70Z53 315 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 PHYKPLQ8IUZ5 450 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 OR56A4Q8NGH8 313 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 CXorf40AQ8TE69 158 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 UBTD2Q8WUN7 234 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 ASB11Q8WXH4 323 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 PPM1EQ8WY54 764 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 DNASE1L2Q92874 299 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 RHBDF1Q96CC6 855 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 HGH1Q9BTY7 390 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 FBRSQ9HAH7 460 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 UTP6Q9NYH9 597 aaKnown RBP13.79□□□□□ -0.2
CLK3-204ENST00000483723 ZNF225Q9UK10 706 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 ST14Q9Y5Y6 855 aa13.79□□□□□ -0.2
CLK3-204ENST00000483723 SLC5A10A0PJK1 596 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 E9PBE3 544 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
CLK3-204ENST00000483723 NEMP1O14524 444 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 MBTPS2O43462 519 aa13.78□□□□□ -0.2
CLK3-204ENST00000483723 SYNCRIPO60506 623 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms