RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 SIGIRRQ6IA17 410 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 RBMS3Q6XE24 437 aaKnown RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 ANO5Q75V66 913 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 CATSPER4Q7RTX7 472 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 CPLX4Q7Z7G2 160 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 GPR180Q86V85 440 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 DIS3L2Q8IYB7 885 aaKnown RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 CCDC13Q8IYE1 715 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 AVL9Q8NBF6 648 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 NFKBIDQ8NI38 313 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 ETNPPLQ8TBG4 499 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 KCNG4Q8TDN1 519 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 FAM120BQ96EK7 910 aaKnown RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 JAKMIP1Q96N16 626 aaKnown RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 ASCL2Q99929 193 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 USP44Q9H0E7 712 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 TRPV4Q9HBA0 871 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 XAB2Q9HCS7 855 aaKnown RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 ACSS1Q9NUB1 689 aaPredicted RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 PDRG1Q9NUG6 133 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 MARCH4Q9P2E8 410 aaPredicted RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 WDR35Q9P2L0 1181 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 ADD3Q9UEY8 706 aaKnown RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 RPS6KA6Q9UK32 745 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 FBXL2Q9UKC9 423 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 PA2G4Q9UQ80 394 aaKnown RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 C2CD2Q9Y426 696 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZFP37Q9Y6Q3 630 aaPredicted RBP2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 RUSC2Q8N2Y8 1516 aa2.87□□□□□ -1.95
LAPTM4A-202ENST00000483117 TTC36A6NLP5 189 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 SEC31AO94979 1220 aaKnown RBP2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 CAVIN2O95810 425 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 IGLV1-44P01699 117 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 THEGLP0DJG4 465 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 DESP17661 470 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZNF10P21506 573 aaPredicted RBP2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 HOXC8P31273 242 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 AHRP35869 848 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 GABRB2P47870 512 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 FASLGP48023 281 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 LMAN1P49257 510 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 LUMP51884 338 aaPredicted RBP2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 BPIFB3P59826 476 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 IFI35P80217 286 aaPredicted RBP2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 RBP5P82980 135 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 UBXN1Q04323 297 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 PTP4A2Q12974 167 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 AIMP2Q13155 320 aaKnown RBP2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 TRIM29Q14134 588 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 TMEM266Q2M3C6 531 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 ALG11Q2TAA5 492 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 DUSP28Q4G0W2 176 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 C18orf63Q68DL7 685 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 ABRAXAS1Q6UWZ7 409 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZNF704Q6ZNC4 412 aaPredicted RBP2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 GTSCR1Q86UQ5 136 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 OR8H3Q8N146 312 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 TMCO5AQ8N6Q1 288 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 TRIML1Q8N9V2 468 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 WDR20Q8TBZ3 569 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 HCAR2Q8TDS4 363 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 USP6NLQ92738 828 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 APBB2Q92870 758 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 TAAR8Q969N4 342 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 ART5Q96L15 291 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 IWS1Q96ST2 819 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 PYGO2Q9BRQ0 406 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 GPATCH1Q9BRR8 931 aaKnown RBP2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 DCTN5Q9BTE1 182 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 HGH1Q9BTY7 390 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLC25A18Q9H1K4 315 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 LRMDAQ9H2I8 198 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 MUC13Q9H3R2 512 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 BICC1Q9H694 974 aaKnown RBP2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 SLC35C2Q9NQQ7 365 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 KCND2Q9NZV8 630 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 FLT1P17948 1338 aa2.86□□□□□ -1.95
LAPTM4A-202ENST00000483117 A0A087X002 238 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 PTGES3LE9PB15 166 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 VILLO15195 856 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 WDR46O15213 610 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 ERAL1O75616 437 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 MLYCDO95822 493 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 CLTBP09497 229 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 P4HA1P13674 534 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 ZNF26P17031 533 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 CDH2P19022 906 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 EPHA8P29322 1005 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 BSGP35613 385 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 MAP2K2P36507 400 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 RGS2P41220 211 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 HNF4AP41235 474 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 APOBEC1P41238 236 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 HARS2P49590 506 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 ALDH3A2P51648 485 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 TPD52P55327 224 aaPredicted RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 PPP2R5CQ13362 524 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 DCTN2Q13561 401 aaKnown RBP2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 FGFBP1Q14512 234 aa2.85□□□□□ -1.95
LAPTM4A-202ENST00000483117 COG2Q14746 738 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms