RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 HAUS6Q7Z4H7 955 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 ADGRA1Q86SQ6 560 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 KMT5CQ86Y97 462 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 CEP97Q8IW35 865 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 OR8H2Q8N162 312 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 RBMXL3Q8N7X1 1067 aaKnown RBP3.71□□□□□ -1.82
CBX3-207ENST00000481300 SYT2Q8N9I0 419 aaPredicted RBP3.71□□□□□ -1.82
CBX3-207ENST00000481300 TMEM255BQ8WV15 326 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 SNRNP27Q8WVK2 155 aaKnown RBP3.71□□□□□ -1.82
CBX3-207ENST00000481300 NEURL2Q9BR09 285 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 SYT17Q9BSW7 474 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 CENPOQ9BU64 300 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 C1QTNF4Q9BXJ3 329 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 KLHL4Q9C0H6 718 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 SPATC1LQ9H0A9 340 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 TMEM30AQ9NV96 361 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 WSB2Q9NYS7 404 aaPredicted RBP3.71□□□□□ -1.82
CBX3-207ENST00000481300 WWOXQ9NZC7 414 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 RCC2Q9P258 522 aaKnown RBP3.71□□□□□ -1.82
CBX3-207ENST00000481300 POLG2Q9UHN1 485 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 HACL1Q9UJ83 578 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 OR2W1Q9Y3N9 320 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 PCDHAC2Q9Y5I4 1007 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 FAM169AQ9Y6X4 670 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 DHX57Q6P158 1386 aaKnown RBP3.71□□□□□ -1.82
CBX3-207ENST00000481300 KIF15Q9NS87 1388 aa3.71□□□□□ -1.82
CBX3-207ENST00000481300 CLSPNQ9HAW4 1339 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 MAPKBP1O60336 1514 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 IGHV4OR15-8A0A075B7B6 117 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 OR5K3A6NET4 321 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 C4orf47A7E2U8 309 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 C15orf62A8K5M9 175 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ANKRD66B4E2M5 251 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ZNF587BE7ETH6 402 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 TMEM178BH3BS89 294 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ADAMDEC1O15204 470 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 IPO8O15397 1037 aaKnown RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 ZNHIT1O43257 154 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ZWINTO95229 277 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 CENPBP07199 599 aaPredicted RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 ABCB1P08183 1280 aaPredicted RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 FAM106CPP0CH98 169 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ITGA2P17301 1181 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 TRIM21P19474 475 aaKnown RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 NMBRP28336 390 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 TERF1P54274 439 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 BRWD1-AS2P59051 145 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ZBTB17Q13105 803 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 GRAPQ13588 217 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 GTF2H2Q13888 395 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 BAATQ14032 418 aaPredicted RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 TMEM266Q2M3C6 531 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 C9orf57Q5W0N0 161 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 DHRS7BQ6IAN0 325 aaPredicted RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 CAPRIN2Q6IMN6 1127 aaKnown RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 NAA16Q6N069 864 aaPredicted RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 GTF2H2CQ6P1K8 395 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 GFRALQ6UXV0 394 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ARMC9Q7Z3E5 817 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 SATL1Q86VE3 508 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 TMPRSS12Q86WS5 348 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 TMEM219Q86XT9 240 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 GALNT13Q8IUC8 556 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.7□□□□□ -1.82
CBX3-207ENST00000481300 NME8Q8N427 588 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 MINDY1Q8N5J2 469 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 C1orf52Q8N6N3 182 aaKnown RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 LSMEM1Q8N8F7 131 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ZNF441Q8N8Z8 693 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 POMGNT2Q8NAT1 580 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 SPATA3Q8NHX4 192 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 BBS10Q8TAM1 723 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 SECTM1Q8WVN6 248 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ZNF622Q969S3 477 aaKnown RBP eCLIP3.7□□□□□ -1.822e-21■■□□□ 12.9
CBX3-207ENST00000481300 PHF21AQ96BD5 680 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 IL17FQ96PD4 163 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 GCNAQ96QF7 691 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ABHD1Q96SE0 405 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 CDRT15Q96T59 188 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 MMP27Q9H306 513 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 KCNK15Q9H427 330 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 TCP11L1Q9NUJ3 509 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 TAB2Q9NYJ8 693 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 MARCH4Q9P2E8 410 aaPredicted RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 LARSQ9P2J5 1176 aaKnown RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 TSPYL4Q9UJ04 414 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 NUP155O75694 1391 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ADGRL1O94910 1474 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 CCDC141Q6ZP82 1450 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ZCCHC11Q5TAX3 1644 aaKnown RBP3.7□□□□□ -1.82
CBX3-207ENST00000481300 PTPN23Q9H3S7 1636 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ARHGEF12Q9NZN5 1544 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 RTEL1-TNFRSF6BF6WH68 1400 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 ANKRD50Q9ULJ7 1429 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 CGNL1Q0VF96 1302 aa3.7□□□□□ -1.82
CBX3-207ENST00000481300 DENND4BO75064 1496 aaPredicted RBP3.69□□□□□ -1.82
CBX3-207ENST00000481300 NEO1Q92859 1461 aa3.69□□□□□ -1.82
CBX3-207ENST00000481300 SHANK2Q9UPX8 1470 aa3.69□□□□□ -1.82
CBX3-207ENST00000481300 DHX29Q7Z478 1369 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms