RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 MX2P20592 715 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 HNRNPH3P31942 346 aaKnown RBP16.75■□□□□ 0.27
VIM-204ENST00000478746 RORAP35398 523 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 SSR1P43307 286 aaKnown RBP16.75■□□□□ 0.27
VIM-204ENST00000478746 SP5Q6BEB4 398 aaPredicted RBP16.75■□□□□ 0.27
VIM-204ENST00000478746 OOSP2Q86WS3 158 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 RAB43Q86YS6 212 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 CARFQ8N187 725 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 BTBD6Q96KE9 485 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 VPS35Q96QK1 796 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 XPO4Q9C0E2 1151 aaKnown RBP16.75■□□□□ 0.27
VIM-204ENST00000478746 FANCEQ9HB96 536 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 IP6K2Q9UHH9 426 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 ENTPD4Q9Y227 616 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 ZNF711Q9Y462 761 aa16.75■□□□□ 0.27
VIM-204ENST00000478746 OR6C74A6NCV1 312 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 LRRC53A6NM62 1247 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 DDX3YO15523 660 aaKnown RBP16.74■□□□□ 0.27
VIM-204ENST00000478746 KLHL41O60662 606 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 ALPPP05187 535 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 PER3P56645 1201 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 DMPKQ09013 629 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 ABRQ12979 859 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 DPYSL3Q14195 570 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 ATP13A5Q4VNC0 1218 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 CRB2Q5IJ48 1285 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 HGSNATQ68CP4 663 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 FBXO38Q6PIJ6 1188 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 IGFL3Q6UXB1 125 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 SYTL1Q8IYJ3 562 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 NIPA2Q8N8Q9 360 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 TRIB3Q96RU7 358 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 BARD1Q99728 777 aaKnown RBP16.74■□□□□ 0.27
VIM-204ENST00000478746 TLR10Q9BXR5 811 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 ISCUQ9H1K1 167 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 ACTR5Q9H9F9 607 aaPredicted RBP16.74■□□□□ 0.27
VIM-204ENST00000478746 AGPAT4Q9NRZ5 378 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 IMP3Q9NV31 184 aaKnown RBP16.74■□□□□ 0.27
VIM-204ENST00000478746 PCMTD2Q9NV79 361 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 BTRCQ9Y297 605 aa16.74■□□□□ 0.27
VIM-204ENST00000478746 KCNK1O00180 336 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 LRRTM2O43300 516 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 LCA5LO95447 670 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 MTHFD1P11586 935 aaKnown RBP16.73■□□□□ 0.27
VIM-204ENST00000478746 OTX2P32243 289 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 CA5AP35218 305 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 ARSEP51690 589 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 KPNA2P52292 529 aaKnown RBP16.73■□□□□ 0.27
VIM-204ENST00000478746 ADCY2Q08462 1091 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 XRCC4Q13426 336 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 HADHQ16836 314 aaKnown RBP16.73■□□□□ 0.27
VIM-204ENST00000478746 ATP13A4Q4VNC1 1196 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 FAM198BQ6UWH4 519 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 FAM83HQ6ZRV2 1179 aaPredicted RBP16.73■□□□□ 0.27
VIM-204ENST00000478746 ZADH2Q8N4Q0 377 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 CNTD1Q8N815 330 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 KCTD6Q8NC69 237 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 ST6GALNAC3Q8NDV1 305 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 ZFPM2Q8WW38 1151 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 HDAC11Q96DB2 347 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 FER1L6-AS2Q96M78 137 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 PPM1MQ96MI6 270 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 IP6K3Q96PC2 410 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 UNKQ9C0B0 810 aaKnown RBP16.73■□□□□ 0.27
VIM-204ENST00000478746 SLC7A5P2Q9GIP4 190 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 BPIFA1Q9NP55 256 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 AIPL1Q9NZN9 384 aa16.73■□□□□ 0.27
VIM-204ENST00000478746 CFAP20Q9Y6A4 193 aaKnown RBP16.73■□□□□ 0.27
VIM-204ENST00000478746 DNMT3AQ9Y6K1 912 aaPredicted RBP16.73■□□□□ 0.27
VIM-204ENST00000478746 CROCCQ5TZA2 2017 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 SLC9B1P1A6NJY1 282 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 TMEM150CB9EJG8 249 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 KRT38O76015 456 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 CYP2A7P20853 494 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 ARCN1P48444 511 aaKnown RBP16.72■□□□□ 0.27
VIM-204ENST00000478746 GBE1Q04446 702 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 KLHL30Q0D2K2 578 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 SLC10A2Q12908 348 aaPredicted RBP16.72■□□□□ 0.27
VIM-204ENST00000478746 NFE2L1Q14494 772 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 MYBPC3Q14896 1274 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 NCF4Q15080 339 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 PCSK7Q16549 785 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 PTCHD3Q3KNS1 767 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 CCDC70Q6NSX1 233 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 APTXQ7Z2E3 356 aaKnown RBP16.72■□□□□ 0.27
VIM-204ENST00000478746 GALNT16Q8N428 558 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 CLEC1AQ8NC01 280 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 OR1L3Q8NH93 324 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 TM9SF4Q92544 642 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 INPP5DQ92835 1189 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 SRPK1Q96SB4 655 aaKnown RBP16.72■□□□□ 0.27
VIM-204ENST00000478746 INSM2Q96T92 566 aaPredicted RBP16.72■□□□□ 0.27
VIM-204ENST00000478746 ZNF552Q9H707 407 aaPredicted RBP16.72■□□□□ 0.27
VIM-204ENST00000478746 RUBCNLQ9H714 662 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 SYTL2Q9HCH5 934 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 CHMP5Q9NZZ3 219 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 SERTAD3Q9UJW9 196 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 ANAPC7Q9UJX3 599 aa16.72■□□□□ 0.27
VIM-204ENST00000478746 NTNG1Q9Y2I2 539 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms